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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170388299
CETZ01070908
160199
Alphaproteobacteria
GGG
Pro
>WENV170388383
CETZ01078431
448544
Alphaproteobacteria
CTG
Gln
>WENV170388680
CETZ01113457
28862
Alphaproteobacteria
GCT
Ser
>WENV170389132
CETZ01245414
369667
Alphaproteobacteria
GGT
Thr
>WENV170388682
CETZ01113542
160201
Alphaproteobacteria
TGG
Pro
>WENV170388104
CETZ01046501
175228
Alphaproteobacteria
CAT
Met
>WENV170388098
CETZ01046094
259563
Alphaproteobacteria
GGC
Ala
>WENV170388442
CETZ01085501
160197
Alphaproteobacteria
GTC
Asp
>WENV170388667
CETZ01111842
325069
Alphaproteobacteria
TTT
Lys
>WENV170388829
CETZ01129931
107653
Alphaproteobacteria
GTA
Tyr
>WENV170388390
CETZ01079394
309182
Alphaproteobacteria
TAC
Val
>WENV170388436
CETZ01084807
105419
Alphaproteobacteria
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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