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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170388806
CETZ01125311
260563
Bacteroidota
>WENV170388812
CETZ01125502
105453
Bacteroidota
TAG
Leu
>WENV170389041
CETZ01217579
139484
Bacteroidota
TAC
Val
>WENV170388553
CETZ01098894
96382
Bacteroidota
GTA
Tyr
>WENV170388408
CETZ01081755
263627
Bacteroidota
TTG
Gln
>WENV170387767
CETZ01010426
177164
Bacteroidota
GTC
Asp
>WENV170388414
CETZ01082297
177164
Bacteroidota
GTC
Asp
>WENV170388566
CETZ01100080
139057
Bacteroidota
GAC
Val
>WENV170388554
CETZ01098894
312522
Bacteroidota
TCC
Gly
>WENV170388291
CETZ01069978
144149
Bacteroidota
TGG
Pro
>WENV170388780
CETZ01123751
263162
Bacteroidota
GGG
Pro
>WENV170388030
CETZ01038448
370083
Bacteroidota
TTC
Glu
>WENV170388289
CETZ01069671
328225
Bacteroidota
GAA
Phe
>WENV170388043
CETZ01040046
310118
Bacteroidota
CCA
Trp
>WENV170389261
CETZ01264372
472124
Bacteroidota
GCA
Cys
>WENV170388470
CETZ01089637
259964
Bacteroidota
>WENV170389083
CETZ01227836
160572
Bacteroidota
GGG
Pro
>WENV170389023
CETZ01209798
451846
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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