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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170387785
CETZ01012094
158433
Gammaproteobacteria
ACG
Arg
>WENV170387907
CETZ01024872
448974
Gammaproteobacteria
GCA
Cys
>WENV170388699
CETZ01115762
448974
Gammaproteobacteria
GCA
Cys
>WENV170388923
CETZ01170010
170011
Gammaproteobacteria
CCG
Arg
>WENV170388033
CETZ01038532
105430
Gammaproteobacteria
GTA
Tyr
>WENV170389148
CETZ01249924
448854
Gammaproteobacteria
CCC
Gly
>WENV170388024
CETZ01037797
221435
Gammaproteobacteria
GGG
Pro
>WENV170388732
CETZ01119470
221435
Gammaproteobacteria
GGG
Pro
>WENV170389197
CETZ01261884
260947
Gammaproteobacteria
TTG
Gln
>WENV170389183
CETZ01259887
105723
Gammaproteobacteria
GAG
Leu
>WENV170388722
CETZ01118664
65163
Gammaproteobacteria
CAA
Leu
>WENV170388143
CETZ01050241
285013
Gammaproteobacteria
GGT
Thr
>WENV170387855
CETZ01019004
172986
Gammaproteobacteria
CCA
Trp
>WENV170387780
CETZ01011798
68919
Gammaproteobacteria
CAG
Leu
>WENV170387659
CETZ01000550
448070
Gammaproteobacteria
GCA
Cys
>WENV170387728
CETZ01006269
272540
Gammaproteobacteria
GTT
Asn
>WENV170388141
CETZ01050241
124716
Gammaproteobacteria
GTA
Tyr
>WENV170388374
CETZ01077631
181298
Gammaproteobacteria
>WENV170388283
CETZ01068676
189269
Gammaproteobacteria
CGG
Pro
>WENV170388725
CETZ01118774
258908
Gammaproteobacteria
CCT
Arg
>WENV170388571
CETZ01100571
306475
Gammaproteobacteria
GTG
His
>WENV170388810
CETZ01125402
50028
Gammaproteobacteria
GGA
Ser
>WENV170387698
CETZ01003536
290512
Gammaproteobacteria
TGT
Thr
>WENV170389101
CETZ01233044
67081
Gammaproteobacteria
CAA
Leu
>WENV170387695
CETZ01003450
225112
Gammaproteobacteria
GAT
Ile
>WENV170387757
CETZ01009376
26256
Gammaproteobacteria
CGA
Ser
>WENV170388768
CETZ01123122
161319
Gammaproteobacteria
>WENV170387899
CETZ01023514
261154
Gammaproteobacteria
TGC
Ala
>WENV170388304
CETZ01071152
261154
Gammaproteobacteria
TGC
Ala
>WENV170388469
CETZ01089353
282566
Gammaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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