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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170405018
CEUG01054432
165596
Bacteroidota
GGC
Ala
>WENV170405917
CEUG01232260
166497
Bacteroidota
>WENV170405058
CEUG01059025
184180
Bacteroidota
GTC
Asp
>WENV170404715
CEUG01025070
266737
Bacteroidota
TTT
Lys
>WENV170405129
CEUG01067273
139484
Bacteroidota
TAC
Val
>WENV170405560
CEUG01104938
21418
Bacteroidota
GGA
Ser
>WENV170405141
CEUG01068281
263627
Bacteroidota
TTG
Gln
>WENV170405174
CEUG01071496
263627
Bacteroidota
TTG
Gln
>WENV170405483
CEUG01101227
263627
Bacteroidota
TTG
Gln
>WENV170404731
CEUG01026035
49783
Bacteroidota
TGA
Ser
>WENV170404848
CEUG01036975
49783
Bacteroidota
TGA
Ser
>WENV170405029
CEUG01055787
177164
Bacteroidota
GTC
Asp
>WENV170404693
CEUG01021920
188048
Bacteroidota
GGC
Ala
>WENV170405490
CEUG01101652
188048
Bacteroidota
GGC
Ala
>WENV170404895
CEUG01042608
50353
Bacteroidota
TGA
Ser
>WENV170405783
CEUG01180220
105182
Bacteroidota
CAA
Leu
>WENV170405377
CEUG01093656
265540
Bacteroidota
GAA
Phe
>WENV170405103
CEUG01063618
168483
Bacteroidota
GTT
Asn
>WENV170404876
CEUG01041059
263886
Bacteroidota
TTG
Gln
>WENV170405066
CEUG01060153
263886
Bacteroidota
TTG
Gln
>WENV170404797
CEUG01031277
106261
Bacteroidota
TAG
Leu
>WENV170404795
CEUG01031200
268445
Bacteroidota
GAA
Phe
>WENV170404612
CEUG01016639
18750
Bacteroidota
GGA
Ser
>WENV170405818
CEUG01196520
169560
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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