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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170405167
CEUG01071007
260661
Cyanobacteriota
>WENV170404727
CEUG01025361
161770
Cyanobacteriota
TCT
Arg
>WENV170405399
CEUG01095300
161711
Cyanobacteriota
GTC
Asp
>WENV170405688
CEUG01121551
182044
Cyanobacteriota
GTC
Asp
>WENV170404648
CEUG01019494
265805
Cyanobacteriota
>WENV170404529
CEUG01010698
375129
Cyanobacteriota
TTG
Gln
>WENV170405504
CEUG01102270
105401
Cyanobacteriota
TAG
Leu
>WENV170405280
CEUG01085173
369944
Cyanobacteriota
GAC
Val
>WENV170404805
CEUG01032567
258998
Cyanobacteriota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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