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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170404992
CEUG01051779
174334
Gammaproteobacteria
>WENV170404859
CEUG01038066
451765
Gammaproteobacteria
GCA
Cys
>WENV170405954
CEUG01247818
451765
Gammaproteobacteria
GCA
Cys
>WENV170405573
CEUG01105423
65736
Gammaproteobacteria
TAA
Leu
>WENV170405402
CEUG01095431
301690
Gammaproteobacteria
GGC
Ala
>WENV170404618
CEUG01017001
198774
Gammaproteobacteria
GGG
Pro
>WENV170404619
CEUG01017085
198774
Gammaproteobacteria
GGG
Pro
>WENV170405321
CEUG01089614
198774
Gammaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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