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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170410634
CEUJ01119281
196239
Gammaproteobacteria
TCT
Arg
>WENV170410224
CEUJ01082223
18367
Gammaproteobacteria
GCT
Ser
>WENV170411592
CEUJ01217546
263230
Gammaproteobacteria
TTT
Lys
>WENV170409684
CEUJ01042929
65736
Gammaproteobacteria
TAA
Leu
>WENV170410221
CEUJ01082031
65736
Gammaproteobacteria
TAA
Leu
>WENV170410644
CEUJ01120310
65736
Gammaproteobacteria
TAA
Leu
>WENV170410251
CEUJ01084787
451853
Gammaproteobacteria
GCA
Cys
>WENV170409224
CEUJ01011911
172986
Gammaproteobacteria
CCA
Trp
>WENV170410189
CEUJ01079582
325641
Gammaproteobacteria
CCA
Trp
>WENV170411921
CEUJ01389780
164285
Gammaproteobacteria
TCG
Arg
>WENV170409586
CEUJ01037104
263086
Gammaproteobacteria
GTT
Asn
>WENV170410829
CEUJ01138224
263086
Gammaproteobacteria
GTT
Asn
>WENV170410055
CEUJ01067825
259140
Gammaproteobacteria
TGC
Ala
>WENV170410225
CEUJ01082223
214281
Gammaproteobacteria
ACG
Arg
>WENV170410452
CEUJ01103000
471753
Gammaproteobacteria
GCA
Cys
>WENV170411133
CEUJ01164155
471753
Gammaproteobacteria
GCA
Cys
>WENV170411238
CEUJ01168966
471753
Gammaproteobacteria
GCA
Cys
>WENV170411307
CEUJ01174705
471753
Gammaproteobacteria
GCA
Cys
>WENV170411495
CEUJ01181328
471753
Gammaproteobacteria
GCA
Cys
>WENV170409190
CEUJ01009318
105812
Gammaproteobacteria
GTA
Tyr
>WENV170411179
CEUJ01166031
323358
Gammaproteobacteria
GGT
Thr
>WENV170411386
CEUJ01178257
265381
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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