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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170417309
CEUL01289071
396582
Alphaproteobacteria
GAC
Val
>WENV170417345
CEUL01300242
396582
Alphaproteobacteria
GAC
Val
>WENV170416910
CEUL01148541
228004
Alphaproteobacteria
ACG
Arg
>WENV170417195
CEUL01243308
218844
Alphaproteobacteria
CCT
Arg
>WENV170415341
CEUL01033184
166628
Alphaproteobacteria
CAT
Met
>WENV170416856
CEUL01147416
166628
Alphaproteobacteria
CAT
Met
>WENV170415301
CEUL01030484
32838
Alphaproteobacteria
GCT
Ser
>WENV170417378
CEUL01313164
160215
Alphaproteobacteria
CAT
Met
>WENV170416805
CEUL01146225
318054
Alphaproteobacteria
TAC
Val
>WENV170417554
CEUL01360384
380133
Alphaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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