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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170423847
CEUO01034165
196239
Gammaproteobacteria
TCT
Arg
>WENV170424119
CEUO01068906
256881
Gammaproteobacteria
GTG
His
>WENV170424013
CEUO01055787
107577
Gammaproteobacteria
GTA
Tyr
>WENV170423974
CEUO01052394
64826
Gammaproteobacteria
TAA
Leu
>WENV170424378
CEUO01106590
448854
Gammaproteobacteria
CCC
Gly
>WENV170424574
CEUO01201111
49782
Gammaproteobacteria
TGA
Ser
>WENV170424269
CEUO01090575
105723
Gammaproteobacteria
GAG
Leu
>WENV170423864
CEUO01036794
172986
Gammaproteobacteria
CCA
Trp
>WENV170423887
CEUO01039309
172986
Gammaproteobacteria
CCA
Trp
>WENV170424123
CEUO01069454
276047
Gammaproteobacteria
GTG
His
>WENV170423952
CEUO01048542
449061
Gammaproteobacteria
TCC
Gly
>WENV170424120
CEUO01068906
106574
Gammaproteobacteria
TAG
Leu
>WENV170424137
CEUO01071127
172971
Gammaproteobacteria
CCG
Arg
>WENV170424559
CEUO01197975
26187
Gammaproteobacteria
GGA
Ser
>WENV170423852
CEUO01034904
282654
Gammaproteobacteria
GGC
Ala
>WENV170424418
CEUO01136240
259743
Gammaproteobacteria
TTT
Lys
>WENV170424598
CEUO01204758
449783
Gammaproteobacteria
TCC
Gly
>WENV170424465
CEUO01163484
161115
Gammaproteobacteria
CCG
Arg
>WENV170424520
CEUO01184645
26256
Gammaproteobacteria
CGA
Ser
>WENV170423643
CEUO01006319
391133
Gammaproteobacteria
TTG
Gln
>WENV170423845
CEUO01033429
64852
Gammaproteobacteria
CAG
Leu
>WENV170423846
CEUO01033429
64852
Gammaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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