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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170425160
CEUP01046730
64719
Gammaproteobacteria
CAG
Leu
>WENV170424636
CEUP01001096
158433
Gammaproteobacteria
ACG
Arg
>WENV170425248
CEUP01050262
105041
Gammaproteobacteria
CAA
Leu
>WENV170424816
CEUP01014850
160812
Gammaproteobacteria
CCT
Arg
>WENV170424825
CEUP01015446
258302
Gammaproteobacteria
GTT
Asn
>WENV170424810
CEUP01014033
323464
Gammaproteobacteria
TTT
Lys
>WENV170424811
CEUP01014033
323464
Gammaproteobacteria
TTT
Lys
>WENV170424638
CEUP01001178
466478
Gammaproteobacteria
GCA
Cys
>WENV170424691
CEUP01003563
179231
Gammaproteobacteria
CCT
Arg
>WENV170424993
CEUP01029643
270870
Gammaproteobacteria
GAA
Phe
>WENV170424851
CEUP01017543
161456
Gammaproteobacteria
TCT
Arg
>WENV170425277
CEUP01054468
161116
Gammaproteobacteria
GAC
Val
>WENV170425466
CEUP01104526
448854
Gammaproteobacteria
CCC
Gly
>WENV170424850
CEUP01017505
115678
Gammaproteobacteria
GTA
Tyr
>WENV170425046
CEUP01035905
18245
Gammaproteobacteria
TGA
Ser
>WENV170425246
CEUP01050169
21793
Gammaproteobacteria
GGA
Ser
>WENV170424858
CEUP01018035
221435
Gammaproteobacteria
GGG
Pro
>WENV170425068
CEUP01039095
221435
Gammaproteobacteria
GGG
Pro
>WENV170425437
CEUP01101524
26499
Gammaproteobacteria
GGA
Ser
>WENV170424781
CEUP01010322
105192
Gammaproteobacteria
CAA
Leu
>WENV170424921
CEUP01022980
18561
Gammaproteobacteria
TGA
Ser
>WENV170425231
CEUP01049723
105723
Gammaproteobacteria
GAG
Leu
>WENV170424859
CEUP01018114
159516
Gammaproteobacteria
CCT
Arg
>WENV170425404
CEUP01095874
412618
Gammaproteobacteria
TTG
Gln
>WENV170425326
CEUP01076850
49699
Gammaproteobacteria
TGA
Ser
>WENV170425075
CEUP01039840
257139
Gammaproteobacteria
TGT
Thr
>WENV170424911
CEUP01021688
181298
Gammaproteobacteria
>WENV170424912
CEUP01021858
181298
Gammaproteobacteria
>WENV170425071
CEUP01039392
158484
Gammaproteobacteria
CCT
Arg
>WENV170424788
CEUP01011288
158482
Gammaproteobacteria
TCG
Arg
>WENV170425401
CEUP01094857
26187
Gammaproteobacteria
GGA
Ser
>WENV170425072
CEUP01039394
26102
Gammaproteobacteria
GCT
Ser
>WENV170425269
CEUP01051757
218763
Gammaproteobacteria
CAT
Met
>WENV170424666
CEUP01002530
214281
Gammaproteobacteria
ACG
Arg
>WENV170424688
CEUP01003563
214281
Gammaproteobacteria
ACG
Arg
>WENV170424689
CEUP01003563
214281
Gammaproteobacteria
ACG
Arg
>WENV170424690
CEUP01003563
214281
Gammaproteobacteria
ACG
Arg
>WENV170425078
CEUP01039840
257140
Gammaproteobacteria
GGT
Thr
>WENV170425334
CEUP01081114
324336
Gammaproteobacteria
GTG
His
>WENV170425090
CEUP01041556
257134
Gammaproteobacteria
GTG
His
>WENV170425270
CEUP01051861
50028
Gammaproteobacteria
GGA
Ser
>WENV170424997
CEUP01030992
18233
Gammaproteobacteria
TGA
Ser
>WENV170425081
CEUP01040081
290512
Gammaproteobacteria
TGT
Thr
>WENV170425171
CEUP01048212
290512
Gammaproteobacteria
TGT
Thr
>WENV170425422
CEUP01100306
399907
Gammaproteobacteria
TTG
Gln
>WENV170425407
CEUP01096894
18503
Gammaproteobacteria
GGA
Ser
>WENV170424752
CEUP01008461
67081
Gammaproteobacteria
CAA
Leu
>WENV170424903
CEUP01020619
159179
Gammaproteobacteria
>WENV170424941
CEUP01024532
26256
Gammaproteobacteria
CGA
Ser
>WENV170425173
CEUP01048367
26256
Gammaproteobacteria
CGA
Ser
>WENV170425040
CEUP01035184
161319
Gammaproteobacteria
>WENV170425098
CEUP01043045
65858
Gammaproteobacteria
CAA
Leu
>WENV170424787
CEUP01011288
271866
Gammaproteobacteria
TTT
Lys
>WENV170425089
CEUP01041556
203482
Gammaproteobacteria
TCT
Arg
>WENV170425070
CEUP01039383
257091
Gammaproteobacteria
>WENV170425032
CEUP01033991
263987
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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