This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170425650
CEUQ01012663
261853
Gammaproteobacteria
GTT
Asn
>WENV170427497
CEUQ01177659
257463
Gammaproteobacteria
TTT
Lys
>WENV170426348
CEUQ01075212
108980
Gammaproteobacteria
TAG
Leu
>WENV170428447
CEUQ01452523
108980
Gammaproteobacteria
TAG
Leu
>WENV170427225
CEUQ01159082
270870
Gammaproteobacteria
GAA
Phe
>WENV170427226
CEUQ01159082
270870
Gammaproteobacteria
GAA
Phe
>WENV170427959
CEUQ01259564
262285
Gammaproteobacteria
TGC
Ala
>WENV170428254
CEUQ01392928
160668
Gammaproteobacteria
CAT
Met
>WENV170427346
CEUQ01167924
65736
Gammaproteobacteria
TAA
Leu
>WENV170426688
CEUQ01106237
172909
Gammaproteobacteria
>WENV170428047
CEUQ01305061
260947
Gammaproteobacteria
TTG
Gln
>WENV170427192
CEUQ01154616
159525
Gammaproteobacteria
GAC
Val
>WENV170425756
CEUQ01022381
271191
Gammaproteobacteria
CCA
Trp
>WENV170427285
CEUQ01163387
285013
Gammaproteobacteria
GGT
Thr
>WENV170427656
CEUQ01185737
451853
Gammaproteobacteria
GCA
Cys
>WENV170426962
CEUQ01132924
68919
Gammaproteobacteria
CAG
Leu
>WENV170428443
CEUQ01452155
164285
Gammaproteobacteria
TCG
Arg
>WENV170427150
CEUQ01150693
272540
Gammaproteobacteria
GTT
Asn
>WENV170425653
CEUQ01012886
112932
Gammaproteobacteria
GAG
Leu
>WENV170425849
CEUQ01028150
256945
Gammaproteobacteria
GAA
Phe
>WENV170426749
CEUQ01112816
449061
Gammaproteobacteria
TCC
Gly
>WENV170428320
CEUQ01412025
158434
Gammaproteobacteria
ACG
Arg
>WENV170428245
CEUQ01389358
107578
Gammaproteobacteria
GAG
Leu
>WENV170426546
CEUQ01093917
259140
Gammaproteobacteria
TGC
Ala
>WENV170426329
CEUQ01073469
263347
Gammaproteobacteria
TTT
Lys
>WENV170425727
CEUQ01019637
257590
Gammaproteobacteria
GGT
Thr
>WENV170426750
CEUQ01112816
257590
Gammaproteobacteria
GGT
Thr
>WENV170427510
CEUQ01178340
284995
Gammaproteobacteria
GTG
His
>WENV170428067
CEUQ01321190
198780
Gammaproteobacteria
>WENV170425544
CEUQ01003933
290512
Gammaproteobacteria
TGT
Thr
>WENV170428077
CEUQ01324086
28927
Gammaproteobacteria
GGA
Ser
>WENV170428107
CEUQ01337342
462237
Gammaproteobacteria
GCA
Cys
>WENV170427103
CEUQ01146450
263987
Gammaproteobacteria
TTT
Lys
>WENV170425729
CEUQ01019844
265381
Gammaproteobacteria
GTT
Asn
>WENV170428283
CEUQ01399197
90637
Gammaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK