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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170429377
CEUR01052490
413342
Bacteroidota
TTC
Glu
>WENV170430158
CEUR01184258
277731
Bacteroidota
>WENV170428960
CEUR01017033
116954
Bacteroidota
TAG
Leu
>WENV170429096
CEUR01027330
50545
Bacteroidota
TAA
Leu
>WENV170429398
CEUR01053842
57357
Bacteroidota
TGA
Ser
>WENV170430094
CEUR01126114
153255
Bacteroidota
TGG
Pro
>WENV170429221
CEUR01039100
263627
Bacteroidota
TTG
Gln
>WENV170428835
CEUR01006809
177164
Bacteroidota
GTC
Asp
>WENV170429714
CEUR01073348
257687
Bacteroidota
TTT
Lys
>WENV170429924
CEUR01079920
321470
Bacteroidota
GAA
Phe
>WENV170429011
CEUR01020323
24600
Bacteroidota
GGA
Ser
>WENV170429301
CEUR01045714
168483
Bacteroidota
GTT
Asn
>WENV170428952
CEUR01015643
263886
Bacteroidota
TTG
Gln
>WENV170429374
CEUR01052133
263886
Bacteroidota
TTG
Gln
>WENV170428811
CEUR01005101
310118
Bacteroidota
CCA
Trp
>WENV170428748
CEUR01000915
23145
Bacteroidota
GGA
Ser
>WENV170429133
CEUR01031562
158985
Bacteroidota
GTC
Asp
>WENV170428772
CEUR01002688
301008
Bacteroidota
TTG
Gln
>WENV170429056
CEUR01023520
301008
Bacteroidota
TTG
Gln
>WENV170429949
CEUR01080324
301008
Bacteroidota
TTG
Gln
>WENV170428865
CEUR01009232
139231
Bacteroidota
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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