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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170444488
CEUX01110297
105453
Bacteroidota
TAG
Leu
>WENV170444275
CEUX01081859
170034
Bacteroidota
>WENV170444704
CEUX01206797
42366
Bacteroidota
TAA
Leu
>WENV170444706
CEUX01207777
51705
Bacteroidota
TGA
Ser
>WENV170444389
CEUX01099955
169559
Bacteroidota
GGG
Pro
>WENV170444423
CEUX01102194
161475
Bacteroidota
TCG
Arg
>WENV170444303
CEUX01087057
160351
Bacteroidota
TCT
Arg
>WENV170444703
CEUX01206797
258133
Bacteroidota
>WENV170444374
CEUX01099267
107633
Bacteroidota
GTA
Tyr
>WENV170444089
CEUX01052226
144149
Bacteroidota
TGG
Pro
>WENV170443739
CEUX01008099
158981
Bacteroidota
GGC
Ala
>WENV170444375
CEUX01099303
454104
Bacteroidota
GCA
Cys
>WENV170444349
CEUX01094947
161476
Bacteroidota
>WENV170444650
CEUX01189316
69028
Bacteroidota
GAG
Leu
>WENV170444294
CEUX01085762
158985
Bacteroidota
GTC
Asp
>WENV170444040
CEUX01047566
301008
Bacteroidota
TTG
Gln
>WENV170444258
CEUX01079859
158556
Bacteroidota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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