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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170449254
CEUZ01049926
108977
Bacteroidota
TAG
Leu
>WENV170448686
CEUZ01023713
166497
Bacteroidota
>WENV170448748
CEUZ01026465
116954
Bacteroidota
TAG
Leu
>WENV170448531
CEUZ01015259
50545
Bacteroidota
TAA
Leu
>WENV170451401
CEUZ01186162
159105
Bacteroidota
TCG
Arg
>WENV170450270
CEUZ01104040
177164
Bacteroidota
GTC
Asp
>WENV170453365
CEUZ01393605
139057
Bacteroidota
GAC
Val
>WENV170453176
CEUZ01291779
310118
Bacteroidota
CCA
Trp
>WENV170450691
CEUZ01134039
18750
Bacteroidota
GGA
Ser
>WENV170451660
CEUZ01204600
18750
Bacteroidota
GGA
Ser
>WENV170448799
CEUZ01028592
65708
Bacteroidota
GCT
Ser
>WENV170451206
CEUZ01170475
301008
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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