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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170458053
CEVB01026886
256881
Gammaproteobacteria
GTG
His
>WENV170458139
CEVB01036598
18367
Gammaproteobacteria
GCT
Ser
>WENV170458505
CEVB01082218
198668
Gammaproteobacteria
>WENV170457906
CEVB01006545
64826
Gammaproteobacteria
TAA
Leu
>WENV170457883
CEVB01004982
159102
Gammaproteobacteria
TGG
Pro
>WENV170457955
CEVB01012832
176077
Gammaproteobacteria
ACG
Arg
>WENV170457956
CEVB01012832
176077
Gammaproteobacteria
ACG
Arg
>WENV170458726
CEVB01158032
369295
Gammaproteobacteria
CCT
Arg
>WENV170458176
CEVB01043724
159791
Gammaproteobacteria
CCA
Trp
>WENV170457903
CEVB01006545
49782
Gammaproteobacteria
TGA
Ser
>WENV170458214
CEVB01050143
448070
Gammaproteobacteria
GCA
Cys
>WENV170457939
CEVB01011119
276047
Gammaproteobacteria
GTG
His
>WENV170458625
CEVB01135798
449061
Gammaproteobacteria
TCC
Gly
>WENV170458140
CEVB01036598
188594
Gammaproteobacteria
ACG
Arg
>WENV170458141
CEVB01036598
188594
Gammaproteobacteria
ACG
Arg
>WENV170458528
CEVB01087036
172971
Gammaproteobacteria
CCG
Arg
>WENV170458352
CEVB01070080
26187
Gammaproteobacteria
GGA
Ser
>WENV170458100
CEVB01032310
257884
Gammaproteobacteria
GCC
Gly
>WENV170457847
CEVB01001057
162062
Gammaproteobacteria
TCT
Arg
>WENV170458263
CEVB01059553
159793
Gammaproteobacteria
CAT
Met
>WENV170458407
CEVB01075676
449783
Gammaproteobacteria
TCC
Gly
>WENV170457954
CEVB01012832
26283
Gammaproteobacteria
GCT
Ser
>WENV170457928
CEVB01009427
26256
Gammaproteobacteria
CGA
Ser
>WENV170457945
CEVB01011412
391133
Gammaproteobacteria
TTG
Gln
>WENV170457946
CEVB01011412
391133
Gammaproteobacteria
TTG
Gln
>WENV170458068
CEVB01029883
64852
Gammaproteobacteria
CAG
Leu
>WENV170458069
CEVB01029883
64852
Gammaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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