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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170458824
CEVC01006709
177853
Bacteroidota
GAT
Ile
>WENV170459498
CEVC01059080
184180
Bacteroidota
GTC
Asp
>WENV170460111
CEVC01114975
265680
Bacteroidota
>WENV170460740
CEVC01170091
302353
Bacteroidota
TTG
Gln
>WENV170460731
CEVC01169888
449969
Bacteroidota
GCA
Cys
>WENV170460335
CEVC01141244
139484
Bacteroidota
TAC
Val
>WENV170460524
CEVC01158281
381777
Bacteroidota
TTC
Glu
>WENV170459843
CEVC01088738
263627
Bacteroidota
TTG
Gln
>WENV170459624
CEVC01070321
49783
Bacteroidota
TGA
Ser
>WENV170460296
CEVC01136676
49783
Bacteroidota
TGA
Ser
>WENV170460577
CEVC01162530
49783
Bacteroidota
TGA
Ser
>WENV170461033
CEVC01251266
108835
Bacteroidota
CAA
Leu
>WENV170461182
CEVC01309891
164620
Bacteroidota
GTG
His
>WENV170461018
CEVC01237224
263162
Bacteroidota
GGG
Pro
>WENV170460850
CEVC01172291
188006
Bacteroidota
TCT
Arg
>WENV170459500
CEVC01059309
259269
Bacteroidota
GAA
Phe
>WENV170458758
CEVC01000893
268445
Bacteroidota
GAA
Phe
>WENV170458819
CEVC01006547
280181
Bacteroidota
GCC
Gly
>WENV170458839
CEVC01008134
301008
Bacteroidota
TTG
Gln
>WENV170459221
CEVC01036647
139231
Bacteroidota
GAC
Val
>WENV170460961
CEVC01204619
172819
Bacteroidota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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