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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170461076
CEVC01269311
256881
Gammaproteobacteria
GTG
His
>WENV170458934
CEVC01014995
451765
Gammaproteobacteria
GCA
Cys
>WENV170459798
CEVC01084706
257075
Gammaproteobacteria
GTG
His
>WENV170460792
CEVC01171441
113189
Gammaproteobacteria
GAG
Leu
>WENV170460870
CEVC01172382
161665
Gammaproteobacteria
CCG
Arg
>WENV170460113
CEVC01115101
65736
Gammaproteobacteria
TAA
Leu
>WENV170460546
CEVC01160261
65736
Gammaproteobacteria
TAA
Leu
>WENV170460707
CEVC01168965
65736
Gammaproteobacteria
TAA
Leu
>WENV170460585
CEVC01163071
172909
Gammaproteobacteria
>WENV170459867
CEVC01091363
301690
Gammaproteobacteria
GGC
Ala
>WENV170459872
CEVC01091738
301690
Gammaproteobacteria
GGC
Ala
>WENV170459766
CEVC01082227
451853
Gammaproteobacteria
GCA
Cys
>WENV170460943
CEVC01193842
164285
Gammaproteobacteria
TCG
Arg
>WENV170459093
CEVC01026697
263086
Gammaproteobacteria
GTT
Asn
>WENV170459879
CEVC01092624
263086
Gammaproteobacteria
GTT
Asn
>WENV170460017
CEVC01105204
449061
Gammaproteobacteria
TCC
Gly
>WENV170461077
CEVC01269311
106574
Gammaproteobacteria
TAG
Leu
>WENV170459823
CEVC01086020
259140
Gammaproteobacteria
TGC
Ala
>WENV170458770
CEVC01002022
257590
Gammaproteobacteria
GGT
Thr
>WENV170459857
CEVC01090165
257590
Gammaproteobacteria
GGT
Thr
>WENV170460456
CEVC01154410
21486
Gammaproteobacteria
TGA
Ser
>WENV170460909
CEVC01174868
301409
Gammaproteobacteria
TGC
Ala
>WENV170459475
CEVC01056747
290512
Gammaproteobacteria
TGT
Thr
>WENV170460301
CEVC01137239
290512
Gammaproteobacteria
TGT
Thr
>WENV170459398
CEVC01051241
191341
Gammaproteobacteria
CAT
Met
>WENV170458769
CEVC01002022
105812
Gammaproteobacteria
GTA
Tyr
>WENV170459003
CEVC01019901
105812
Gammaproteobacteria
GTA
Tyr
>WENV170460536
CEVC01159549
26256
Gammaproteobacteria
CGA
Ser
>WENV170459070
CEVC01024878
265381
Gammaproteobacteria
GTT
Asn
>WENV170459169
CEVC01033160
265381
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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