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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170468306
CEVF01023955
160199
Alphaproteobacteria
GGG
Pro
>WENV170468307
CEVF01024035
369984
Alphaproteobacteria
TTG
Gln
>WENV170470601
CEVF01304703
448544
Alphaproteobacteria
CTG
Gln
>WENV170468903
CEVF01070399
204618
Alphaproteobacteria
ACG
Arg
>WENV170469103
CEVF01086098
396582
Alphaproteobacteria
GAC
Val
>WENV170469338
CEVF01107345
129948
Alphaproteobacteria
>WENV170468065
CEVF01008037
383423
Alphaproteobacteria
GAC
Val
>WENV170470397
CEVF01261295
114135
Alphaproteobacteria
GTA
Tyr
>WENV170469596
CEVF01128088
217424
Alphaproteobacteria
GGG
Pro
>WENV170468007
CEVF01004309
160201
Alphaproteobacteria
TGG
Pro
>WENV170469984
CEVF01152090
380153
Alphaproteobacteria
TTG
Gln
>WENV170469708
CEVF01136418
159282
Alphaproteobacteria
TCT
Arg
>WENV170469567
CEVF01125686
290990
Alphaproteobacteria
TGT
Thr
>WENV170468176
CEVF01015521
393349
Alphaproteobacteria
GGT
Thr
>WENV170468523
CEVF01039885
125394
Alphaproteobacteria
CAA
Leu
>WENV170470022
CEVF01153260
409526
Alphaproteobacteria
GGT
Thr
>WENV170469122
CEVF01087139
32122
Alphaproteobacteria
GCT
Ser
>WENV170469251
CEVF01098042
32122
Alphaproteobacteria
GCT
Ser
>WENV170468865
CEVF01067235
278582
Alphaproteobacteria
TTC
Glu
>WENV170468915
CEVF01070853
210188
Alphaproteobacteria
CCG
Arg
>WENV170469756
CEVF01139765
28530
Alphaproteobacteria
TGA
Ser
>WENV170469888
CEVF01148053
406362
Alphaproteobacteria
GAA
Phe
>WENV170469074
CEVF01082762
278841
Alphaproteobacteria
TTT
Lys
>WENV170469604
CEVF01128805
171458
Alphaproteobacteria
TCT
Arg
>WENV170468258
CEVF01020169
382465
Alphaproteobacteria
>WENV170468332
CEVF01025523
377113
Alphaproteobacteria
GAC
Val
>WENV170468279
CEVF01021731
124623
Alphaproteobacteria
>WENV170468212
CEVF01017929
207103
Alphaproteobacteria
GTG
His
>WENV170469544
CEVF01123103
207103
Alphaproteobacteria
GTG
His
>WENV170468815
CEVF01062470
220291
Alphaproteobacteria
CCG
Arg
>WENV170468537
CEVF01041335
160575
Alphaproteobacteria
CCT
Arg
>WENV170469221
CEVF01095050
369158
Alphaproteobacteria
GGT
Thr
>WENV170470014
CEVF01152936
382308
Alphaproteobacteria
GAA
Phe
>WENV170468913
CEVF01070724
371034
Alphaproteobacteria
GAC
Val
>WENV170469961
CEVF01151410
371034
Alphaproteobacteria
GAC
Val
>WENV170469703
CEVF01136090
162180
Alphaproteobacteria
GTG
His
>WENV170468066
CEVF01008197
105419
Alphaproteobacteria
TAA
Leu
>WENV170468022
CEVF01005115
65064
Alphaproteobacteria
GAG
Leu
>WENV170468504
CEVF01038208
27338
Alphaproteobacteria
CGA
Ser
>WENV170469172
CEVF01091535
166369
Alphaproteobacteria
>WENV170469337
CEVF01107290
163875
Alphaproteobacteria
ACG
Arg
>WENV170469595
CEVF01128078
85470
Alphaproteobacteria
CAG
Leu
>WENV170470510
CEVF01290583
302791
Alphaproteobacteria
CGT
Thr
>WENV170470347
CEVF01249831
233224
Alphaproteobacteria
GTC
Asp
>WENV170468752
CEVF01057237
32835
Alphaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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