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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
88 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170468542
CEVF01041618
323812
Cyanobacteriota
GGC
Ala
>WENV170469186
CEVF01092643
323812
Cyanobacteriota
GGC
Ala
>WENV170469630
CEVF01130618
323812
Cyanobacteriota
GGC
Ala
>WENV170470011
CEVF01152891
323812
Cyanobacteriota
GGC
Ala
>WENV170467976
CEVF01002462
400868
Cyanobacteriota
TTG
Gln
>WENV170468236
CEVF01019001
400868
Cyanobacteriota
TTG
Gln
>WENV170468317
CEVF01024840
400868
Cyanobacteriota
TTG
Gln
>WENV170468937
CEVF01072046
400868
Cyanobacteriota
TTG
Gln
>WENV170469697
CEVF01135763
400868
Cyanobacteriota
TTG
Gln
>WENV170468172
CEVF01015333
105782
Cyanobacteriota
AAG
Leu
>WENV170468609
CEVF01047388
105782
Cyanobacteriota
AAG
Leu
>WENV170469458
CEVF01117567
105782
Cyanobacteriota
AAG
Leu
>WENV170469486
CEVF01119232
105782
Cyanobacteriota
AAG
Leu
>WENV170470399
CEVF01261577
161186
Cyanobacteriota
>WENV170468456
CEVF01034056
29220
Cyanobacteriota
CGA
Ser
>WENV170469682
CEVF01134196
29220
Cyanobacteriota
CGA
Ser
>WENV170468048
CEVF01006974
105781
Cyanobacteriota
TAG
Leu
>WENV170468204
CEVF01017340
105781
Cyanobacteriota
TAG
Leu
>WENV170469107
CEVF01086141
105781
Cyanobacteriota
TAG
Leu
>WENV170469148
CEVF01089481
105781
Cyanobacteriota
TAG
Leu
>WENV170469479
CEVF01118772
105781
Cyanobacteriota
TAG
Leu
>WENV170469551
CEVF01123982
105781
Cyanobacteriota
TAG
Leu
>WENV170468207
CEVF01017461
160110
Cyanobacteriota
CCG
Arg
>WENV170468838
CEVF01065427
161770
Cyanobacteriota
TCT
Arg
>WENV170468840
CEVF01065666
161770
Cyanobacteriota
TCT
Arg
>WENV170468992
CEVF01075809
161770
Cyanobacteriota
TCT
Arg
>WENV170469160
CEVF01090417
161770
Cyanobacteriota
TCT
Arg
>WENV170469223
CEVF01095053
161770
Cyanobacteriota
TCT
Arg
>WENV170469266
CEVF01099223
161770
Cyanobacteriota
TCT
Arg
>WENV170469271
CEVF01100016
161770
Cyanobacteriota
TCT
Arg
>WENV170469296
CEVF01102353
161770
Cyanobacteriota
TCT
Arg
>WENV170469318
CEVF01104433
161770
Cyanobacteriota
TCT
Arg
>WENV170469490
CEVF01119545
161770
Cyanobacteriota
TCT
Arg
>WENV170469505
CEVF01120734
161770
Cyanobacteriota
TCT
Arg
>WENV170469535
CEVF01122353
161770
Cyanobacteriota
TCT
Arg
>WENV170469623
CEVF01130125
161770
Cyanobacteriota
TCT
Arg
>WENV170469662
CEVF01132610
161770
Cyanobacteriota
TCT
Arg
>WENV170469738
CEVF01138628
161770
Cyanobacteriota
TCT
Arg
>WENV170469824
CEVF01144310
161770
Cyanobacteriota
TCT
Arg
>WENV170469827
CEVF01144699
161770
Cyanobacteriota
TCT
Arg
>WENV170469856
CEVF01146243
161770
Cyanobacteriota
TCT
Arg
>WENV170469865
CEVF01146929
161770
Cyanobacteriota
TCT
Arg
>WENV170469907
CEVF01148883
161770
Cyanobacteriota
TCT
Arg
>WENV170469938
CEVF01150278
161770
Cyanobacteriota
TCT
Arg
>WENV170469948
CEVF01150602
161770
Cyanobacteriota
TCT
Arg
>WENV170470050
CEVF01153893
161770
Cyanobacteriota
TCT
Arg
>WENV170470078
CEVF01154607
161770
Cyanobacteriota
TCT
Arg
>WENV170467960
CEVF01001347
161770
Cyanobacteriota
TCT
Arg
>WENV170468030
CEVF01005388
161770
Cyanobacteriota
TCT
Arg
>WENV170468037
CEVF01005675
161770
Cyanobacteriota
TCT
Arg
>WENV170468067
CEVF01008215
161770
Cyanobacteriota
TCT
Arg
>WENV170468278
CEVF01021643
161770
Cyanobacteriota
TCT
Arg
>WENV170468299
CEVF01023425
161770
Cyanobacteriota
TCT
Arg
>WENV170468381
CEVF01028864
161770
Cyanobacteriota
TCT
Arg
>WENV170468463
CEVF01034850
161770
Cyanobacteriota
TCT
Arg
>WENV170468555
CEVF01042719
161770
Cyanobacteriota
TCT
Arg
>WENV170468608
CEVF01047275
161770
Cyanobacteriota
TCT
Arg
>WENV170468703
CEVF01053919
161770
Cyanobacteriota
TCT
Arg
>WENV170468704
CEVF01053943
161770
Cyanobacteriota
TCT
Arg
>WENV170468799
CEVF01060700
161770
Cyanobacteriota
TCT
Arg
>WENV170468828
CEVF01064478
161770
Cyanobacteriota
TCT
Arg
>WENV170468894
CEVF01069362
161711
Cyanobacteriota
GTC
Asp
>WENV170469658
CEVF01132278
161711
Cyanobacteriota
GTC
Asp
>WENV170468047
CEVF01006872
302627
Cyanobacteriota
GGC
Ala
>WENV170468129
CEVF01012421
302627
Cyanobacteriota
GGC
Ala
>WENV170468443
CEVF01033389
302627
Cyanobacteriota
GGC
Ala
>WENV170468574
CEVF01043640
302627
Cyanobacteriota
GGC
Ala
>WENV170468745
CEVF01056931
302627
Cyanobacteriota
GGC
Ala
>WENV170468012
CEVF01004707
258993
Cyanobacteriota
CCA
Trp
>WENV170468893
CEVF01069362
258993
Cyanobacteriota
CCA
Trp
>WENV170468629
CEVF01049190
161771
Cyanobacteriota
CAT
Met
>WENV170469395
CEVF01111640
161771
Cyanobacteriota
CAT
Met
>WENV170469627
CEVF01130543
161771
Cyanobacteriota
CAT
Met
>WENV170469733
CEVF01138212
161771
Cyanobacteriota
CAT
Met
>WENV170468946
CEVF01072609
258996
Cyanobacteriota
GTG
His
>WENV170469008
CEVF01078063
105401
Cyanobacteriota
TAG
Leu
>WENV170469274
CEVF01100317
369944
Cyanobacteriota
GAC
Val
>WENV170469178
CEVF01091949
229867
Cyanobacteriota
>WENV170469460
CEVF01117855
258998
Cyanobacteriota
CGT
Thr
>WENV170468625
CEVF01049007
36294
Cyanobacteriota
GGA
Ser
>WENV170469376
CEVF01110409
161725
Cyanobacteriota
TCT
Arg
>WENV170468171
CEVF01015279
65045
Cyanobacteriota
CAG
Leu
>WENV170467946
CEVF01000629
89069
Cyanobacteriota
CAA
Leu
>WENV170468124
CEVF01011892
118386
Cyanobacteriota
AAG
Leu
>WENV170469166
CEVF01090837
225134
Cyanobacteriota
CCG
Arg
>WENV170468873
CEVF01067936
370924
Cyanobacteriota
CCC
Gly
>WENV170468906
CEVF01070495
370924
Cyanobacteriota
CCC
Gly
>WENV170469503
CEVF01120480
370924
Cyanobacteriota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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