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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170468364
CEVF01027479
67514
Gammaproteobacteria
TAA
Leu
>WENV170468761
CEVF01057679
18367
Gammaproteobacteria
GCT
Ser
>WENV170468246
CEVF01019701
198668
Gammaproteobacteria
>WENV170468302
CEVF01023519
113189
Gammaproteobacteria
GAG
Leu
>WENV170470066
CEVF01154362
161665
Gammaproteobacteria
CCG
Arg
>WENV170468071
CEVF01008396
262285
Gammaproteobacteria
TGC
Ala
>WENV170469049
CEVF01081027
448854
Gammaproteobacteria
CCC
Gly
>WENV170468163
CEVF01014527
230238
Gammaproteobacteria
TGG
Pro
>WENV170469925
CEVF01149856
21308
Gammaproteobacteria
GGA
Ser
>WENV170468343
CEVF01026501
105723
Gammaproteobacteria
GAG
Leu
>WENV170468531
CEVF01040670
229608
Gammaproteobacteria
CAT
Met
>WENV170467974
CEVF01002291
172986
Gammaproteobacteria
CCA
Trp
>WENV170468280
CEVF01021754
172986
Gammaproteobacteria
CCA
Trp
>WENV170468801
CEVF01061043
172986
Gammaproteobacteria
CCA
Trp
>WENV170469474
CEVF01118224
172986
Gammaproteobacteria
CCA
Trp
>WENV170468359
CEVF01027398
412618
Gammaproteobacteria
TTG
Gln
>WENV170469174
CEVF01091617
448070
Gammaproteobacteria
GCA
Cys
>WENV170470428
CEVF01270422
107578
Gammaproteobacteria
GAG
Leu
>WENV170468334
CEVF01025586
323307
Gammaproteobacteria
GGT
Thr
>WENV170468658
CEVF01050838
161327
Gammaproteobacteria
ACG
Arg
>WENV170469292
CEVF01101919
307111
Gammaproteobacteria
TAC
Val
>WENV170468262
CEVF01020317
171915
Gammaproteobacteria
GAC
Val
>WENV170468151
CEVF01013993
214281
Gammaproteobacteria
ACG
Arg
>WENV170468152
CEVF01013993
214281
Gammaproteobacteria
ACG
Arg
>WENV170468831
CEVF01064974
324336
Gammaproteobacteria
GTG
His
>WENV170469748
CEVF01139264
290512
Gammaproteobacteria
TGT
Thr
>WENV170468395
CEVF01030366
67081
Gammaproteobacteria
CAA
Leu
>WENV170468270
CEVF01020852
471753
Gammaproteobacteria
GCA
Cys
>WENV170468879
CEVF01068369
471753
Gammaproteobacteria
GCA
Cys
>WENV170468333
CEVF01025586
105812
Gammaproteobacteria
GTA
Tyr
>WENV170469798
CEVF01142746
26256
Gammaproteobacteria
CGA
Ser
>WENV170468287
CEVF01022044
323358
Gammaproteobacteria
GGT
Thr
>WENV170468363
CEVF01027479
462237
Gammaproteobacteria
GCA
Cys
>WENV170470610
CEVF01305544
161319
Gammaproteobacteria
>WENV170470546
CEVF01295589
261154
Gammaproteobacteria
TGC
Ala
>WENV170468716
CEVF01054370
479393
Gammaproteobacteria
GCA
Cys
>WENV170470496
CEVF01288139
64842
Gammaproteobacteria
CAA
Leu
>WENV170468133
CEVF01012543
449736
Gammaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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