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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170471035
CEVG01031073
413342
Bacteroidota
TTC
Glu
>WENV170472439
CEVG01161906
277731
Bacteroidota
>WENV170471361
CEVG01061228
211965
Bacteroidota
GTT
Asn
>WENV170471645
CEVG01091473
461415
Bacteroidota
CCA
Trp
>WENV170471740
CEVG01101369
314601
Bacteroidota
>WENV170470754
CEVG01008133
139505
Bacteroidota
TAC
Val
>WENV170470766
CEVG01009627
139505
Bacteroidota
TAC
Val
>WENV170471550
CEVG01082590
139505
Bacteroidota
TAC
Val
>WENV170471736
CEVG01101131
220163
Bacteroidota
TCT
Arg
>WENV170472686
CEVG01265498
261457
Bacteroidota
GCC
Gly
>WENV170471624
CEVG01089121
106605
Bacteroidota
CAA
Leu
>WENV170471762
CEVG01103410
50545
Bacteroidota
TAA
Leu
>WENV170470847
CEVG01015321
211884
Bacteroidota
TGC
Ala
>WENV170472778
CEVG01296028
161063
Bacteroidota
CAT
Met
>WENV170470910
CEVG01020018
57357
Bacteroidota
TGA
Ser
>WENV170471273
CEVG01052051
57357
Bacteroidota
TGA
Ser
>WENV170471713
CEVG01099802
57357
Bacteroidota
TGA
Ser
>WENV170471464
CEVG01071689
263627
Bacteroidota
TTG
Gln
>WENV170471021
CEVG01029784
49783
Bacteroidota
TGA
Ser
>WENV170472409
CEVG01161100
49783
Bacteroidota
TGA
Ser
>WENV170471712
CEVG01099626
177164
Bacteroidota
GTC
Asp
>WENV170471372
CEVG01062369
106227
Bacteroidota
GTA
Tyr
>WENV170470977
CEVG01024841
321470
Bacteroidota
GAA
Phe
>WENV170472225
CEVG01149936
321470
Bacteroidota
GAA
Phe
>WENV170471134
CEVG01039932
50353
Bacteroidota
TGA
Ser
>WENV170472119
CEVG01141015
371968
Bacteroidota
CCT
Arg
>WENV170470887
CEVG01018387
71400
Bacteroidota
GCT
Ser
>WENV170470776
CEVG01010250
263886
Bacteroidota
TTG
Gln
>WENV170471619
CEVG01087971
263886
Bacteroidota
TTG
Gln
>WENV170470750
CEVG01007792
310118
Bacteroidota
CCA
Trp
>WENV170471505
CEVG01077750
310118
Bacteroidota
CCA
Trp
>WENV170471686
CEVG01095409
310118
Bacteroidota
CCA
Trp
>WENV170471839
CEVG01112536
310118
Bacteroidota
CCA
Trp
>WENV170471975
CEVG01127069
310118
Bacteroidota
CCA
Trp
>WENV170472062
CEVG01135164
310118
Bacteroidota
CCA
Trp
>WENV170472066
CEVG01135344
310118
Bacteroidota
CCA
Trp
>WENV170471988
CEVG01128005
23145
Bacteroidota
GGA
Ser
>WENV170471867
CEVG01115972
158985
Bacteroidota
GTC
Asp
>WENV170472227
CEVG01150222
311172
Bacteroidota
GAA
Phe
>WENV170470720
CEVG01005554
325477
Bacteroidota
TTG
Gln
>WENV170471257
CEVG01050711
301008
Bacteroidota
TTG
Gln
>WENV170471571
CEVG01084380
301008
Bacteroidota
TTG
Gln
>WENV170471717
CEVG01100168
301008
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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