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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170471685
CEVG01095376
196239
Gammaproteobacteria
TCT
Arg
>WENV170471996
CEVG01128296
196239
Gammaproteobacteria
TCT
Arg
>WENV170472463
CEVG01169545
448974
Gammaproteobacteria
GCA
Cys
>WENV170470725
CEVG01006176
257895
Gammaproteobacteria
TTT
Lys
>WENV170471521
CEVG01079369
309075
Gammaproteobacteria
GTT
Asn
>WENV170471227
CEVG01048258
198668
Gammaproteobacteria
>WENV170471738
CEVG01101186
160115
Gammaproteobacteria
GGG
Pro
>WENV170471627
CEVG01089433
49830
Gammaproteobacteria
GGA
Ser
>WENV170471865
CEVG01115819
64907
Gammaproteobacteria
GAG
Leu
>WENV170472470
CEVG01174360
319314
Gammaproteobacteria
TGT
Thr
>WENV170472451
CEVG01163011
162167
Gammaproteobacteria
CCG
Arg
>WENV170471073
CEVG01034181
71882
Gammaproteobacteria
TAA
Leu
>WENV170471146
CEVG01040342
65736
Gammaproteobacteria
TAA
Leu
>WENV170472053
CEVG01134491
65736
Gammaproteobacteria
TAA
Leu
>WENV170472204
CEVG01148556
65736
Gammaproteobacteria
TAA
Leu
>WENV170472533
CEVG01201128
260947
Gammaproteobacteria
TTG
Gln
>WENV170472943
CEVG01333670
65163
Gammaproteobacteria
CAA
Leu
>WENV170472537
CEVG01204357
20140
Gammaproteobacteria
>WENV170470802
CEVG01012312
451853
Gammaproteobacteria
GCA
Cys
>WENV170470839
CEVG01014769
451853
Gammaproteobacteria
GCA
Cys
>WENV170472221
CEVG01149662
451853
Gammaproteobacteria
GCA
Cys
>WENV170472319
CEVG01156058
451853
Gammaproteobacteria
GCA
Cys
>WENV170470823
CEVG01013454
325641
Gammaproteobacteria
CCA
Trp
>WENV170472054
CEVG01134619
164285
Gammaproteobacteria
TCG
Arg
>WENV170471510
CEVG01078433
263086
Gammaproteobacteria
GTT
Asn
>WENV170472606
CEVG01234398
448815
Gammaproteobacteria
TCC
Gly
>WENV170471901
CEVG01119853
113788
Gammaproteobacteria
GTA
Tyr
>WENV170471767
CEVG01103954
105274
Gammaproteobacteria
TAG
Leu
>WENV170471123
CEVG01038427
171915
Gammaproteobacteria
GAC
Val
>WENV170471226
CEVG01048214
301409
Gammaproteobacteria
TGC
Ala
>WENV170472381
CEVG01159846
65495
Gammaproteobacteria
GAG
Leu
>WENV170471637
CEVG01090135
160116
Gammaproteobacteria
GAC
Val
>WENV170471342
CEVG01059759
105812
Gammaproteobacteria
GTA
Tyr
>WENV170471345
CEVG01059950
448350
Gammaproteobacteria
TCC
Gly
>WENV170471346
CEVG01059950
369546
Gammaproteobacteria
GGT
Thr
>WENV170472839
CEVG01312876
65858
Gammaproteobacteria
CAA
Leu
>WENV170470785
CEVG01011194
265381
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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