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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170474022
CEVH01094054
413342
Bacteroidota
TTC
Glu
>WENV170475411
CEVH01350593
277731
Bacteroidota
>WENV170474716
CEVH01167957
300555
Bacteroidota
CCA
Trp
>WENV170474913
CEVH01185931
302353
Bacteroidota
TTG
Gln
>WENV170473549
CEVH01046025
211884
Bacteroidota
TGC
Ala
>WENV170474577
CEVH01154349
172147
Bacteroidota
GGC
Ala
>WENV170475209
CEVH01279358
263627
Bacteroidota
TTG
Gln
>WENV170474013
CEVH01092638
177164
Bacteroidota
GTC
Asp
>WENV170474388
CEVH01133956
177164
Bacteroidota
GTC
Asp
>WENV170474447
CEVH01140517
177164
Bacteroidota
GTC
Asp
>WENV170474749
CEVH01170672
164620
Bacteroidota
GTG
His
>WENV170473142
CEVH01008326
144149
Bacteroidota
TGG
Pro
>WENV170474132
CEVH01104793
144149
Bacteroidota
TGG
Pro
>WENV170474875
CEVH01182588
144149
Bacteroidota
TGG
Pro
>WENV170473102
CEVH01005245
321470
Bacteroidota
GAA
Phe
>WENV170473733
CEVH01067598
321470
Bacteroidota
GAA
Phe
>WENV170474115
CEVH01102007
321470
Bacteroidota
GAA
Phe
>WENV170474339
CEVH01127807
321470
Bacteroidota
GAA
Phe
>WENV170474914
CEVH01185941
321470
Bacteroidota
GAA
Phe
>WENV170474969
CEVH01188784
50353
Bacteroidota
TGA
Ser
>WENV170473144
CEVH01008338
168483
Bacteroidota
GTT
Asn
>WENV170473329
CEVH01024332
263886
Bacteroidota
TTG
Gln
>WENV170473689
CEVH01063460
263886
Bacteroidota
TTG
Gln
>WENV170474428
CEVH01138137
263886
Bacteroidota
TTG
Gln
>WENV170474650
CEVH01162830
263886
Bacteroidota
TTG
Gln
>WENV170473412
CEVH01034608
188637
Bacteroidota
GTT
Asn
>WENV170473813
CEVH01074921
152195
Bacteroidota
TAC
Val
>WENV170473201
CEVH01013966
310118
Bacteroidota
CCA
Trp
>WENV170473557
CEVH01047124
310118
Bacteroidota
CCA
Trp
>WENV170473664
CEVH01060547
310118
Bacteroidota
CCA
Trp
>WENV170474592
CEVH01156208
310118
Bacteroidota
CCA
Trp
>WENV170474003
CEVH01091184
259964
Bacteroidota
>WENV170473252
CEVH01017932
301008
Bacteroidota
TTG
Gln
>WENV170473555
CEVH01046863
301008
Bacteroidota
TTG
Gln
>WENV170473643
CEVH01058111
301008
Bacteroidota
TTG
Gln
>WENV170473858
CEVH01077941
301008
Bacteroidota
TTG
Gln
>WENV170474726
CEVH01168534
301008
Bacteroidota
TTG
Gln
>WENV170473243
CEVH01016944
89123
Bacteroidota
GCT
Ser
>WENV170474280
CEVH01120464
68352
Bacteroidota
GCT
Ser
>WENV170474006
CEVH01091996
60145
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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