This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170474130
CEVH01104379
323812
Cyanobacteriota
GGC
Ala
>WENV170474139
CEVH01105167
400868
Cyanobacteriota
TTG
Gln
>WENV170474344
CEVH01128102
400868
Cyanobacteriota
TTG
Gln
>WENV170474448
CEVH01140526
29220
Cyanobacteriota
CGA
Ser
>WENV170473881
CEVH01080677
160110
Cyanobacteriota
CCG
Arg
>WENV170474781
CEVH01174282
160110
Cyanobacteriota
CCG
Arg
>WENV170473922
CEVH01085224
161711
Cyanobacteriota
GTC
Asp
>WENV170473994
CEVH01090596
182044
Cyanobacteriota
GTC
Asp
>WENV170473244
CEVH01017298
265805
Cyanobacteriota
>WENV170474881
CEVH01183262
160107
Cyanobacteriota
CAT
Met
>WENV170474605
CEVH01156865
391767
Cyanobacteriota
TAC
Val
>WENV170474825
CEVH01177242
391767
Cyanobacteriota
TAC
Val
>WENV170474733
CEVH01169160
177202
Cyanobacteriota
TCT
Arg
>WENV170474819
CEVH01176699
258993
Cyanobacteriota
CCA
Trp
>WENV170474396
CEVH01134933
317075
Cyanobacteriota
CGC
Ala
>WENV170474851
CEVH01180534
317075
Cyanobacteriota
CGC
Ala
>WENV170474351
CEVH01129064
161771
Cyanobacteriota
CAT
Met
>WENV170474617
CEVH01158248
105402
Cyanobacteriota
CAA
Leu
>WENV170473565
CEVH01048328
114789
Cyanobacteriota
TAG
Leu
>WENV170473195
CEVH01013415
369944
Cyanobacteriota
GAC
Val
>WENV170474501
CEVH01145664
206160
Cyanobacteriota
CAT
Met
>WENV170473572
CEVH01048856
258998
Cyanobacteriota
CGT
Thr
>WENV170474247
CEVH01117079
258998
Cyanobacteriota
CGT
Thr
>WENV170473041
CEVH01000600
36294
Cyanobacteriota
GGA
Ser
>WENV170474409
CEVH01136309
36294
Cyanobacteriota
GGA
Ser
>WENV170473589
CEVH01050994
369938
Cyanobacteriota
GTT
Asn
>WENV170474378
CEVH01132888
41370
Cyanobacteriota
TAA
Leu
>WENV170474046
CEVH01096109
159041
Cyanobacteriota
GTC
Asp
>WENV170474337
CEVH01127425
65045
Cyanobacteriota
CAG
Leu
>WENV170473619
CEVH01053911
89069
Cyanobacteriota
CAA
Leu
>WENV170473968
CEVH01087946
89069
Cyanobacteriota
CAA
Leu
>WENV170473415
CEVH01035354
65386
Cyanobacteriota
CAG
Leu
>WENV170473880
CEVH01080079
65386
Cyanobacteriota
CAG
Leu
>WENV170474712
CEVH01167783
65386
Cyanobacteriota
CAG
Leu
>WENV170474790
CEVH01174920
65386
Cyanobacteriota
CAG
Leu
>WENV170473645
CEVH01058311
225134
Cyanobacteriota
CCG
Arg
>WENV170473713
CEVH01065255
225134
Cyanobacteriota
CCG
Arg
>WENV170473951
CEVH01086645
225134
Cyanobacteriota
CCG
Arg
>WENV170475228
CEVH01292278
370924
Cyanobacteriota
CCC
Gly
>WENV170473287
CEVH01020839
406747
Cyanobacteriota
TGT
Thr
>WENV170473758
CEVH01069627
406747
Cyanobacteriota
TGT
Thr
>WENV170474286
CEVH01122063
406747
Cyanobacteriota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK