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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170474048
CEVH01096353
195797
Gammaproteobacteria
ACG
Arg
>WENV170473378
CEVH01028941
189345
Gammaproteobacteria
ACG
Arg
>WENV170474951
CEVH01188374
198668
Gammaproteobacteria
>WENV170474828
CEVH01178305
108980
Gammaproteobacteria
TAG
Leu
>WENV170473057
CEVH01001558
235419
Gammaproteobacteria
>WENV170473199
CEVH01013609
305458
Gammaproteobacteria
TAC
Val
>WENV170473307
CEVH01022215
231877
Gammaproteobacteria
GAT
Ile
>WENV170473507
CEVH01043876
65736
Gammaproteobacteria
TAA
Leu
>WENV170473424
CEVH01036174
451853
Gammaproteobacteria
GCA
Cys
>WENV170473827
CEVH01075869
325641
Gammaproteobacteria
CCA
Trp
>WENV170474176
CEVH01108597
257697
Gammaproteobacteria
GTG
His
>WENV170474557
CEVH01152270
323307
Gammaproteobacteria
GGT
Thr
>WENV170475264
CEVH01306678
195820
Gammaproteobacteria
GTG
His
>WENV170474041
CEVH01096048
301409
Gammaproteobacteria
TGC
Ala
>WENV170473506
CEVH01043876
471753
Gammaproteobacteria
GCA
Cys
>WENV170474598
CEVH01156706
471753
Gammaproteobacteria
GCA
Cys
>WENV170473726
CEVH01066616
225112
Gammaproteobacteria
GAT
Ile
>WENV170474108
CEVH01101677
105812
Gammaproteobacteria
GTA
Tyr
>WENV170474189
CEVH01109883
369546
Gammaproteobacteria
GGT
Thr
>WENV170473146
CEVH01008600
261154
Gammaproteobacteria
TGC
Ala
>WENV170473797
CEVH01072976
326324
Gammaproteobacteria
TGC
Ala
>WENV170473311
CEVH01022734
265381
Gammaproteobacteria
GTT
Asn
>WENV170473394
CEVH01032235
265381
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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