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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170478002
CEVK01000581
160802
Alphaproteobacteria
TGG
Pro
>WENV170478274
CEVK01030887
369984
Alphaproteobacteria
TTG
Gln
>WENV170478680
CEVK01080386
369984
Alphaproteobacteria
TTG
Gln
>WENV170478210
CEVK01024476
195158
Alphaproteobacteria
GTC
Asp
>WENV170478899
CEVK01105461
448544
Alphaproteobacteria
CTG
Gln
>WENV170478720
CEVK01085188
67633
Alphaproteobacteria
CAG
Leu
>WENV170478275
CEVK01031074
160201
Alphaproteobacteria
TGG
Pro
>WENV170479067
CEVK01162524
166628
Alphaproteobacteria
CAT
Met
>WENV170479240
CEVK01209548
161302
Alphaproteobacteria
TGG
Pro
>WENV170478999
CEVK01133038
26119
Alphaproteobacteria
CGA
Ser
>WENV170478547
CEVK01063619
383286
Alphaproteobacteria
GGT
Thr
>WENV170478667
CEVK01079066
383286
Alphaproteobacteria
GGT
Thr
>WENV170478429
CEVK01048628
448545
Alphaproteobacteria
>WENV170479124
CEVK01179872
259213
Alphaproteobacteria
GGC
Ala
>WENV170478183
CEVK01021191
278841
Alphaproteobacteria
TTT
Lys
>WENV170478280
CEVK01032039
107829
Alphaproteobacteria
CAA
Leu
>WENV170478722
CEVK01085297
369743
Alphaproteobacteria
GAC
Val
>WENV170479130
CEVK01181236
369743
Alphaproteobacteria
GAC
Val
>WENV170478404
CEVK01044871
448579
Alphaproteobacteria
GCA
Cys
>WENV170478114
CEVK01013328
173035
Alphaproteobacteria
GTG
His
>WENV170478124
CEVK01014280
173035
Alphaproteobacteria
GTG
His
>WENV170478931
CEVK01107617
173035
Alphaproteobacteria
GTG
His
>WENV170478527
CEVK01060808
161060
Alphaproteobacteria
ACG
Arg
>WENV170478906
CEVK01105886
160575
Alphaproteobacteria
CCT
Arg
>WENV170478517
CEVK01059203
369406
Alphaproteobacteria
GAC
Val
>WENV170478580
CEVK01067956
400075
Alphaproteobacteria
CAC
Val
>WENV170478669
CEVK01079297
382308
Alphaproteobacteria
GAA
Phe
>WENV170478654
CEVK01077603
172838
Alphaproteobacteria
ACG
Arg
>WENV170479193
CEVK01196612
160254
Alphaproteobacteria
CCA
Trp
>WENV170478099
CEVK01011100
65064
Alphaproteobacteria
GAG
Leu
>WENV170478309
CEVK01034309
262836
Alphaproteobacteria
TAC
Val
>WENV170478809
CEVK01097495
262836
Alphaproteobacteria
TAC
Val
>WENV170478868
CEVK01102765
259212
Alphaproteobacteria
TGT
Thr
>WENV170478892
CEVK01105132
12053
Alphaproteobacteria
GCT
Ser
>WENV170478902
CEVK01105570
27338
Alphaproteobacteria
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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