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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170478515
CEVK01058981
370833
Bacteroidota
TTG
Gln
>WENV170478944
CEVK01107705
105453
Bacteroidota
TAG
Leu
>WENV170478298
CEVK01033616
370082
Bacteroidota
GGT
Thr
>WENV170478470
CEVK01054088
300555
Bacteroidota
CCA
Trp
>WENV170478025
CEVK01003997
160349
Bacteroidota
GTG
His
>WENV170478418
CEVK01047296
160351
Bacteroidota
TCT
Arg
>WENV170478885
CEVK01104550
160351
Bacteroidota
TCT
Arg
>WENV170478928
CEVK01107559
160351
Bacteroidota
TCT
Arg
>WENV170479095
CEVK01170548
50019
Bacteroidota
TGA
Ser
>WENV170478247
CEVK01027776
68627
Bacteroidota
GCT
Ser
>WENV170479243
CEVK01210214
170035
Bacteroidota
GTT
Asn
>WENV170478386
CEVK01042897
21418
Bacteroidota
GGA
Ser
>WENV170478677
CEVK01080221
300647
Bacteroidota
TTT
Lys
>WENV170478503
CEVK01057553
65365
Bacteroidota
GCT
Ser
>WENV170478159
CEVK01017910
177164
Bacteroidota
GTC
Asp
>WENV170478333
CEVK01035992
171098
Bacteroidota
>WENV170478594
CEVK01069547
171098
Bacteroidota
>WENV170478773
CEVK01091182
159372
Bacteroidota
GGC
Ala
>WENV170478023
CEVK01003800
158981
Bacteroidota
GGC
Ala
>WENV170478927
CEVK01107504
158981
Bacteroidota
GGC
Ala
>WENV170478865
CEVK01102395
454104
Bacteroidota
GCA
Cys
>WENV170478254
CEVK01028515
175654
Bacteroidota
GAT
Ile
>WENV170478139
CEVK01016492
71400
Bacteroidota
GCT
Ser
>WENV170478054
CEVK01006462
106261
Bacteroidota
TAG
Leu
>WENV170478501
CEVK01057445
268445
Bacteroidota
GAA
Phe
>WENV170478620
CEVK01073820
268445
Bacteroidota
GAA
Phe
>WENV170478801
CEVK01096161
268445
Bacteroidota
GAA
Phe
>WENV170478945
CEVK01107725
161018
Bacteroidota
>WENV170478947
CEVK01107759
111503
Bacteroidota
CAA
Leu
>WENV170478539
CEVK01062469
158985
Bacteroidota
GTC
Asp
>WENV170478879
CEVK01104272
158985
Bacteroidota
GTC
Asp
>WENV170478946
CEVK01107737
158985
Bacteroidota
GTC
Asp
>WENV170478491
CEVK01056874
301008
Bacteroidota
TTG
Gln
>WENV170478499
CEVK01057304
301008
Bacteroidota
TTG
Gln
>WENV170478573
CEVK01066986
301008
Bacteroidota
TTG
Gln
>WENV170478789
CEVK01094354
301008
Bacteroidota
TTG
Gln
>WENV170478261
CEVK01028878
370169
Bacteroidota
CCT
Arg
>WENV170479262
CEVK01214313
160572
Bacteroidota
GGG
Pro
>WENV170478565
CEVK01065772
451846
Bacteroidota
GCA
Cys
>WENV170478420
CEVK01047506
139231
Bacteroidota
GAC
Val
>WENV170478910
CEVK01106067
169560
Bacteroidota
GTG
His
>WENV170479269
CEVK01215052
169560
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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