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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170478541
CEVK01062508
196239
Gammaproteobacteria
TCT
Arg
>WENV170478125
CEVK01014666
18367
Gammaproteobacteria
GCT
Ser
>WENV170478250
CEVK01027918
105430
Gammaproteobacteria
GTA
Tyr
>WENV170478466
CEVK01053782
271888
Gammaproteobacteria
TGC
Ala
>WENV170478767
CEVK01090637
65736
Gammaproteobacteria
TAA
Leu
>WENV170478136
CEVK01016020
112932
Gammaproteobacteria
GAG
Leu
>WENV170478692
CEVK01081361
297257
Gammaproteobacteria
TGC
Ala
>WENV170478126
CEVK01014666
188594
Gammaproteobacteria
ACG
Arg
>WENV170478904
CEVK01105613
181298
Gammaproteobacteria
>WENV170479076
CEVK01165716
158482
Gammaproteobacteria
TCG
Arg
>WENV170478548
CEVK01063625
263347
Gammaproteobacteria
TTT
Lys
>WENV170478396
CEVK01043909
257590
Gammaproteobacteria
GGT
Thr
>WENV170478068
CEVK01007662
284995
Gammaproteobacteria
GTG
His
>WENV170478256
CEVK01028585
178032
Gammaproteobacteria
GGG
Pro
>WENV170479230
CEVK01207931
50028
Gammaproteobacteria
GGA
Ser
>WENV170478352
CEVK01038030
290512
Gammaproteobacteria
TGT
Thr
>WENV170478725
CEVK01085523
26256
Gammaproteobacteria
CGA
Ser
>WENV170479075
CEVK01165716
271866
Gammaproteobacteria
TTT
Lys
>WENV170478109
CEVK01013031
261154
Gammaproteobacteria
TGC
Ala
>WENV170478732
CEVK01086456
261154
Gammaproteobacteria
TGC
Ala
>WENV170478697
CEVK01082442
265381
Gammaproteobacteria
GTT
Asn
>WENV170478066
CEVK01007549
159507
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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