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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170481135
CEVL01167725
260563
Bacteroidota
>WENV170481457
CEVL01187704
265680
Bacteroidota
>WENV170480261
CEVL01082038
188934
Bacteroidota
>WENV170480948
CEVL01151958
321470
Bacteroidota
GAA
Phe
>WENV170480033
CEVL01058221
175654
Bacteroidota
GAT
Ile
>WENV170481568
CEVL01257327
280181
Bacteroidota
GCC
Gly
>WENV170481247
CEVL01175181
164620
Bacteroidota
GTG
His
>WENV170481451
CEVL01186387
169560
Bacteroidota
GTG
His
>WENV170480730
CEVL01133080
168483
Bacteroidota
GTT
Asn
>WENV170481341
CEVL01180039
50545
Bacteroidota
TAA
Leu
>WENV170481736
CEVL01329388
139505
Bacteroidota
TAC
Val
>WENV170480923
CEVL01149586
116954
Bacteroidota
TAG
Leu
>WENV170480220
CEVL01078249
119207
Bacteroidota
TAG
Leu
>WENV170479438
CEVL01012563
263627
Bacteroidota
TTG
Gln
>WENV170480310
CEVL01087391
301008
Bacteroidota
TTG
Gln
>WENV170481295
CEVL01178093
301008
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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