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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170480932
CEVL01150052
174334
Gammaproteobacteria
>WENV170480746
CEVL01134455
161327
Gammaproteobacteria
ACG
Arg
>WENV170481154
CEVL01168928
161665
Gammaproteobacteria
CCG
Arg
>WENV170481084
CEVL01163727
226531
Gammaproteobacteria
CGG
Pro
>WENV170480927
CEVL01149778
161939
Gammaproteobacteria
GAC
Val
>WENV170479891
CEVL01046396
448974
Gammaproteobacteria
GCA
Cys
>WENV170479902
CEVL01047138
471753
Gammaproteobacteria
GCA
Cys
>WENV170481039
CEVL01159789
462237
Gammaproteobacteria
GCA
Cys
>WENV170481131
CEVL01167596
282654
Gammaproteobacteria
GGC
Ala
>WENV170479824
CEVL01041609
259519
Gammaproteobacteria
GGC
Ala
>WENV170480936
CEVL01150632
259519
Gammaproteobacteria
GGC
Ala
>WENV170479911
CEVL01048003
105812
Gammaproteobacteria
GTA
Tyr
>WENV170481025
CEVL01158480
236600
Gammaproteobacteria
GTC
Asp
>WENV170479913
CEVL01048238
195820
Gammaproteobacteria
GTG
His
>WENV170479534
CEVL01020462
261853
Gammaproteobacteria
GTT
Asn
>WENV170479344
CEVL01004580
265381
Gammaproteobacteria
GTT
Asn
>WENV170479691
CEVL01031536
265381
Gammaproteobacteria
GTT
Asn
>WENV170481332
CEVL01179637
265381
Gammaproteobacteria
GTT
Asn
>WENV170481216
CEVL01172837
67514
Gammaproteobacteria
TAA
Leu
>WENV170481390
CEVL01181959
65736
Gammaproteobacteria
TAA
Leu
>WENV170481994
CEVL01378476
65736
Gammaproteobacteria
TAA
Leu
>WENV170481328
CEVL01179423
305458
Gammaproteobacteria
TAC
Val
>WENV170481731
CEVL01328051
307111
Gammaproteobacteria
TAC
Val
>WENV170481485
CEVL01209646
108980
Gammaproteobacteria
TAG
Leu
>WENV170481079
CEVL01163058
164285
Gammaproteobacteria
TCG
Arg
>WENV170480379
CEVL01094626
259140
Gammaproteobacteria
TGC
Ala
>WENV170481638
CEVL01298078
261154
Gammaproteobacteria
TGC
Ala
>WENV170480888
CEVL01146617
230238
Gammaproteobacteria
TGG
Pro
>WENV170480612
CEVL01121584
277410
Gammaproteobacteria
TTT
Lys
>WENV170481261
CEVL01175845
263230
Gammaproteobacteria
TTT
Lys
>WENV170479437
CEVL01012509
263347
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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