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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170497974
CEVS01378120
178592
Alphaproteobacteria
CCT
Arg
>WENV170498004
CEVS01387310
396582
Alphaproteobacteria
GAC
Val
>WENV170496471
CEVS01063045
129948
Alphaproteobacteria
>WENV170497652
CEVS01204014
166628
Alphaproteobacteria
CAT
Met
>WENV170498027
CEVS01392506
380319
Alphaproteobacteria
TTC
Glu
>WENV170497157
CEVS01146346
27419
Alphaproteobacteria
GGA
Ser
>WENV170495924
CEVS01009350
175228
Alphaproteobacteria
CAT
Met
>WENV170496233
CEVS01038994
159552
Alphaproteobacteria
TGG
Pro
>WENV170496125
CEVS01026376
406362
Alphaproteobacteria
GAA
Phe
>WENV170496964
CEVS01120367
114680
Alphaproteobacteria
TAG
Leu
>WENV170497035
CEVS01128613
278841
Alphaproteobacteria
TTT
Lys
>WENV170497510
CEVS01189995
369687
Alphaproteobacteria
GTT
Asn
>WENV170496061
CEVS01020118
377113
Alphaproteobacteria
GAC
Val
>WENV170496270
CEVS01043514
207103
Alphaproteobacteria
GTG
His
>WENV170496131
CEVS01027520
205335
Alphaproteobacteria
GGG
Pro
>WENV170497258
CEVS01164063
449739
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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