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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170496271
CEVS01043598
325201
Bacteroidota
>WENV170495869
CEVS01004749
165596
Bacteroidota
GGC
Ala
>WENV170496876
CEVS01109012
213847
Bacteroidota
GTT
Asn
>WENV170495841
CEVS01002710
369213
Bacteroidota
GCC
Gly
>WENV170496264
CEVS01043201
314601
Bacteroidota
>WENV170496266
CEVS01043201
116954
Bacteroidota
TAG
Leu
>WENV170496826
CEVS01102968
139133
Bacteroidota
GGG
Pro
>WENV170497124
CEVS01140592
139133
Bacteroidota
GGG
Pro
>WENV170497072
CEVS01132619
106605
Bacteroidota
CAA
Leu
>WENV170496411
CEVS01056500
211884
Bacteroidota
TGC
Ala
>WENV170497635
CEVS01198535
161475
Bacteroidota
TCG
Arg
>WENV170496024
CEVS01017390
57357
Bacteroidota
TGA
Ser
>WENV170497287
CEVS01169537
57357
Bacteroidota
TGA
Ser
>WENV170496390
CEVS01054203
160349
Bacteroidota
GTG
His
>WENV170496947
CEVS01118090
160349
Bacteroidota
GTG
His
>WENV170497019
CEVS01125909
160349
Bacteroidota
GTG
His
>WENV170497161
CEVS01147505
268933
Bacteroidota
>WENV170496606
CEVS01077443
448855
Bacteroidota
GCA
Cys
>WENV170496800
CEVS01099614
448855
Bacteroidota
GCA
Cys
>WENV170497315
CEVS01172115
263627
Bacteroidota
TTG
Gln
>WENV170496164
CEVS01031511
177164
Bacteroidota
GTC
Asp
>WENV170496875
CEVS01108848
177164
Bacteroidota
GTC
Asp
>WENV170495985
CEVS01014237
143948
Bacteroidota
TGG
Pro
>WENV170496204
CEVS01036307
119207
Bacteroidota
TAG
Leu
>WENV170497130
CEVS01141654
119207
Bacteroidota
TAG
Leu
>WENV170497555
CEVS01193757
119207
Bacteroidota
TAG
Leu
>WENV170496346
CEVS01050810
321470
Bacteroidota
GAA
Phe
>WENV170496384
CEVS01053484
321470
Bacteroidota
GAA
Phe
>WENV170496730
CEVS01091449
321470
Bacteroidota
GAA
Phe
>WENV170496865
CEVS01107786
321470
Bacteroidota
GAA
Phe
>WENV170496914
CEVS01114564
321470
Bacteroidota
GAA
Phe
>WENV170497316
CEVS01172142
50353
Bacteroidota
TGA
Ser
>WENV170497300
CEVS01170736
370083
Bacteroidota
TTC
Glu
>WENV170496325
CEVS01049075
371968
Bacteroidota
CCT
Arg
>WENV170496263
CEVS01043201
24600
Bacteroidota
GGA
Ser
>WENV170496594
CEVS01076271
24600
Bacteroidota
GGA
Ser
>WENV170496902
CEVS01113391
24600
Bacteroidota
GGA
Ser
>WENV170495982
CEVS01014143
263886
Bacteroidota
TTG
Gln
>WENV170496067
CEVS01020895
263886
Bacteroidota
TTG
Gln
>WENV170496810
CEVS01100834
263886
Bacteroidota
TTG
Gln
>WENV170497313
CEVS01171928
263886
Bacteroidota
TTG
Gln
>WENV170496934
CEVS01117278
188637
Bacteroidota
GTT
Asn
>WENV170495906
CEVS01007751
310118
Bacteroidota
CCA
Trp
>WENV170496609
CEVS01077720
310118
Bacteroidota
CCA
Trp
>WENV170496738
CEVS01092110
310118
Bacteroidota
CCA
Trp
>WENV170497374
CEVS01179492
310118
Bacteroidota
CCA
Trp
>WENV170496467
CEVS01062625
106218
Bacteroidota
CAA
Leu
>WENV170496829
CEVS01103378
106218
Bacteroidota
CAA
Leu
>WENV170497634
CEVS01198535
311172
Bacteroidota
GAA
Phe
>WENV170496592
CEVS01076006
65708
Bacteroidota
GCT
Ser
>WENV170497480
CEVS01187839
259964
Bacteroidota
>WENV170497607
CEVS01197170
259964
Bacteroidota
>WENV170495840
CEVS01002338
301008
Bacteroidota
TTG
Gln
>WENV170496016
CEVS01017174
301008
Bacteroidota
TTG
Gln
>WENV170496053
CEVS01019194
139231
Bacteroidota
GAC
Val
>WENV170496097
CEVS01023068
139231
Bacteroidota
GAC
Val
>WENV170496524
CEVS01069356
139231
Bacteroidota
GAC
Val
>WENV170497356
CEVS01176948
139231
Bacteroidota
GAC
Val
>WENV170496138
CEVS01027758
60145
Bacteroidota
TGA
Ser
>WENV170496360
CEVS01051637
60145
Bacteroidota
TGA
Ser
>WENV170496782
CEVS01097100
60145
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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