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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170507222
CEVX01027265
163041
Nitrososphaerota
TCC
Gly
>WENV170508086
CEVX01124007
139337
Nitrososphaerota
CTC
Glu
>WENV170508119
CEVX01128408
163034
Nitrososphaerota
GCC
Gly
>WENV170508364
CEVX01157441
139965
Nitrososphaerota
>WENV170507210
CEVX01026118
139339
Nitrososphaerota
GAT
Ile
>WENV170507512
CEVX01059947
163036
Nitrososphaerota
>WENV170508314
CEVX01152031
163669
Nitrososphaerota
GTT
Asn
>WENV170507061
CEVX01014210
371796
Nitrososphaerota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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