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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170514226
CEWA01066863
165001
Bacteroidota
GTT
Asn
>WENV170514560
CEWA01095572
60611
Bacteroidota
GCT
Ser
>WENV170514302
CEWA01074727
60695
Bacteroidota
GCT
Ser
>WENV170513929
CEWA01041669
127414
Bacteroidota
TGG
Pro
>WENV170514425
CEWA01084410
127414
Bacteroidota
TGG
Pro
>WENV170514621
CEWA01097707
127414
Bacteroidota
TGG
Pro
>WENV170514400
CEWA01083011
190649
Bacteroidota
GTT
Asn
>WENV170513795
CEWA01031659
44938
Bacteroidota
TGA
Ser
>WENV170514041
CEWA01050263
150454
Bacteroidota
TGT
Thr
>WENV170514220
CEWA01065922
240684
Bacteroidota
TTT
Lys
>WENV170514551
CEWA01095008
145555
Bacteroidota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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