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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170524124
CEWG01398014
396582
Alphaproteobacteria
GAC
Val
>WENV170523655
CEWG01223103
114135
Alphaproteobacteria
GTA
Tyr
>WENV170522569
CEWG01110284
26825
Alphaproteobacteria
GGA
Ser
>WENV170521394
CEWG01005975
212253
Alphaproteobacteria
>WENV170521709
CEWG01029933
166628
Alphaproteobacteria
CAT
Met
>WENV170521347
CEWG01002793
125595
Alphaproteobacteria
>WENV170522380
CEWG01092336
125595
Alphaproteobacteria
>WENV170522637
CEWG01116540
125595
Alphaproteobacteria
>WENV170523160
CEWG01177114
125595
Alphaproteobacteria
>WENV170522727
CEWG01126175
31820
Alphaproteobacteria
TGA
Ser
>WENV170521907
CEWG01046159
406362
Alphaproteobacteria
GAA
Phe
>WENV170522354
CEWG01089360
406362
Alphaproteobacteria
GAA
Phe
>WENV170521860
CEWG01042415
163875
Alphaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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