This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170522416
CEWG01095499
413342
Bacteroidota
TTC
Glu
>WENV170521558
CEWG01017846
165596
Bacteroidota
GGC
Ala
>WENV170521869
CEWG01043119
165596
Bacteroidota
GGC
Ala
>WENV170521554
CEWG01017396
108977
Bacteroidota
TAG
Leu
>WENV170522417
CEWG01095504
108977
Bacteroidota
TAG
Leu
>WENV170521510
CEWG01013472
139596
Bacteroidota
TGG
Pro
>WENV170523653
CEWG01222977
163118
Bacteroidota
CAT
Met
>WENV170524131
CEWG01399916
189987
Bacteroidota
TCT
Arg
>WENV170523338
CEWG01196195
461415
Bacteroidota
CCA
Trp
>WENV170522499
CEWG01103674
163712
Bacteroidota
GGC
Ala
>WENV170522399
CEWG01093218
213847
Bacteroidota
GTT
Asn
>WENV170523304
CEWG01192895
162224
Bacteroidota
GGG
Pro
>WENV170522030
CEWG01060068
265680
Bacteroidota
>WENV170522761
CEWG01130181
139505
Bacteroidota
TAC
Val
>WENV170521639
CEWG01025102
116954
Bacteroidota
TAG
Leu
>WENV170522161
CEWG01074095
116954
Bacteroidota
TAG
Leu
>WENV170522327
CEWG01087104
116954
Bacteroidota
TAG
Leu
>WENV170522766
CEWG01130391
175653
Bacteroidota
TGC
Ala
>WENV170521479
CEWG01011943
139133
Bacteroidota
GGG
Pro
>WENV170522913
CEWG01144539
106605
Bacteroidota
CAA
Leu
>WENV170523554
CEWG01216720
106605
Bacteroidota
CAA
Leu
>WENV170521606
CEWG01023007
139484
Bacteroidota
TAC
Val
>WENV170522334
CEWG01087646
211884
Bacteroidota
TGC
Ala
>WENV170523450
CEWG01208270
161063
Bacteroidota
CAT
Met
>WENV170522702
CEWG01123251
161475
Bacteroidota
TCG
Arg
>WENV170521968
CEWG01052987
57357
Bacteroidota
TGA
Ser
>WENV170523010
CEWG01156152
57357
Bacteroidota
TGA
Ser
>WENV170523432
CEWG01205864
57357
Bacteroidota
TGA
Ser
>WENV170523588
CEWG01218367
57357
Bacteroidota
TGA
Ser
>WENV170524058
CEWG01378221
456030
Bacteroidota
CCA
Trp
>WENV170521857
CEWG01041886
50342
Bacteroidota
TGA
Ser
>WENV170522011
CEWG01058656
50342
Bacteroidota
TGA
Ser
>WENV170523448
CEWG01207691
50342
Bacteroidota
TGA
Ser
>WENV170521372
CEWG01004235
95721
Bacteroidota
GTA
Tyr
>WENV170522002
CEWG01057645
268933
Bacteroidota
>WENV170521646
CEWG01025899
56450
Bacteroidota
TGA
Ser
>WENV170522329
CEWG01087281
448855
Bacteroidota
GCA
Cys
>WENV170522264
CEWG01081237
263627
Bacteroidota
TTG
Gln
>WENV170522629
CEWG01115120
263627
Bacteroidota
TTG
Gln
>WENV170521412
CEWG01007245
177164
Bacteroidota
GTC
Asp
>WENV170521575
CEWG01020172
177164
Bacteroidota
GTC
Asp
>WENV170521864
CEWG01042810
177164
Bacteroidota
GTC
Asp
>WENV170522843
CEWG01137058
188048
Bacteroidota
GGC
Ala
>WENV170523204
CEWG01181123
188048
Bacteroidota
GGC
Ala
>WENV170522641
CEWG01116866
257687
Bacteroidota
TTT
Lys
>WENV170521659
CEWG01026705
264773
Bacteroidota
TTT
Lys
>WENV170523119
CEWG01170586
164620
Bacteroidota
GTG
His
>WENV170522663
CEWG01119648
144149
Bacteroidota
TGG
Pro
>WENV170523675
CEWG01223961
144149
Bacteroidota
TGG
Pro
>WENV170522536
CEWG01106944
263162
Bacteroidota
GGG
Pro
>WENV170524187
CEWG01407404
214919
Bacteroidota
GTG
His
>WENV170521754
CEWG01033558
321470
Bacteroidota
GAA
Phe
>WENV170522034
CEWG01060524
321470
Bacteroidota
GAA
Phe
>WENV170522068
CEWG01063336
321470
Bacteroidota
GAA
Phe
>WENV170522671
CEWG01120868
321470
Bacteroidota
GAA
Phe
>WENV170523245
CEWG01186144
321470
Bacteroidota
GAA
Phe
>WENV170523601
CEWG01219217
321470
Bacteroidota
GAA
Phe
>WENV170522018
CEWG01059137
371968
Bacteroidota
CCT
Arg
>WENV170522130
CEWG01070868
371968
Bacteroidota
CCT
Arg
>WENV170523154
CEWG01175992
168483
Bacteroidota
GTT
Asn
>WENV170523462
CEWG01209831
168483
Bacteroidota
GTT
Asn
>WENV170521506
CEWG01013157
263886
Bacteroidota
TTG
Gln
>WENV170521579
CEWG01020489
263886
Bacteroidota
TTG
Gln
>WENV170521998
CEWG01057221
263886
Bacteroidota
TTG
Gln
>WENV170523127
CEWG01171060
263886
Bacteroidota
TTG
Gln
>WENV170521814
CEWG01039197
304848
Bacteroidota
GCC
Gly
>WENV170521332
CEWG01001026
310118
Bacteroidota
CCA
Trp
>WENV170521553
CEWG01017233
310118
Bacteroidota
CCA
Trp
>WENV170522142
CEWG01072820
310118
Bacteroidota
CCA
Trp
>WENV170522923
CEWG01146135
310118
Bacteroidota
CCA
Trp
>WENV170523277
CEWG01190214
310118
Bacteroidota
CCA
Trp
>WENV170523547
CEWG01216224
106218
Bacteroidota
CAA
Leu
>WENV170521566
CEWG01018759
18750
Bacteroidota
GGA
Ser
>WENV170522573
CEWG01111053
311172
Bacteroidota
GAA
Phe
>WENV170521696
CEWG01028824
325477
Bacteroidota
TTG
Gln
>WENV170522490
CEWG01102890
325477
Bacteroidota
TTG
Gln
>WENV170521478
CEWG01011913
259964
Bacteroidota
>WENV170521629
CEWG01024216
259964
Bacteroidota
>WENV170521786
CEWG01036920
301008
Bacteroidota
TTG
Gln
>WENV170523437
CEWG01206425
301008
Bacteroidota
TTG
Gln
>WENV170523020
CEWG01157747
390361
Bacteroidota
CCT
Arg
>WENV170521702
CEWG01029070
139231
Bacteroidota
GAC
Val
>WENV170521778
CEWG01036060
139231
Bacteroidota
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK