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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170523607
CEWG01219783
323812
Cyanobacteriota
GGC
Ala
>WENV170521806
CEWG01038345
400868
Cyanobacteriota
TTG
Gln
>WENV170522898
CEWG01142571
400868
Cyanobacteriota
TTG
Gln
>WENV170521535
CEWG01016054
105782
Cyanobacteriota
AAG
Leu
>WENV170523503
CEWG01212605
260661
Cyanobacteriota
>WENV170522137
CEWG01071321
161768
Cyanobacteriota
CCG
Arg
>WENV170522959
CEWG01148807
161768
Cyanobacteriota
CCG
Arg
>WENV170523211
CEWG01181411
161768
Cyanobacteriota
CCG
Arg
>WENV170522984
CEWG01151132
29220
Cyanobacteriota
CGA
Ser
>WENV170522504
CEWG01104742
26565
Cyanobacteriota
TGA
Ser
>WENV170522565
CEWG01109833
26565
Cyanobacteriota
TGA
Ser
>WENV170521719
CEWG01031066
105781
Cyanobacteriota
TAG
Leu
>WENV170521986
CEWG01055957
105781
Cyanobacteriota
TAG
Leu
>WENV170522564
CEWG01109707
105781
Cyanobacteriota
TAG
Leu
>WENV170521380
CEWG01005070
160110
Cyanobacteriota
CCG
Arg
>WENV170522695
CEWG01122741
160110
Cyanobacteriota
CCG
Arg
>WENV170523235
CEWG01184364
160110
Cyanobacteriota
CCG
Arg
>WENV170523531
CEWG01214445
161770
Cyanobacteriota
TCT
Arg
>WENV170523170
CEWG01178091
161711
Cyanobacteriota
GTC
Asp
>WENV170522745
CEWG01127968
182044
Cyanobacteriota
GTC
Asp
>WENV170522633
CEWG01115745
399462
Cyanobacteriota
GTT
Asn
>WENV170522805
CEWG01133372
258993
Cyanobacteriota
CCA
Trp
>WENV170523111
CEWG01168635
258993
Cyanobacteriota
CCA
Trp
>WENV170522981
CEWG01150859
317075
Cyanobacteriota
CGC
Ala
>WENV170523148
CEWG01175432
161771
Cyanobacteriota
CAT
Met
>WENV170521929
CEWG01048505
258996
Cyanobacteriota
GTG
His
>WENV170522046
CEWG01061954
258996
Cyanobacteriota
GTG
His
>WENV170522623
CEWG01114555
258996
Cyanobacteriota
GTG
His
>WENV170523775
CEWG01234007
370891
Cyanobacteriota
CGT
Thr
>WENV170521828
CEWG01039925
161838
Cyanobacteriota
GGG
Pro
>WENV170523502
CEWG01212429
161838
Cyanobacteriota
GGG
Pro
>WENV170522022
CEWG01059221
105401
Cyanobacteriota
TAG
Leu
>WENV170521352
CEWG01003042
369944
Cyanobacteriota
GAC
Val
>WENV170522396
CEWG01092773
369944
Cyanobacteriota
GAC
Val
>WENV170521374
CEWG01004375
206160
Cyanobacteriota
CAT
Met
>WENV170521467
CEWG01011283
258998
Cyanobacteriota
CGT
Thr
>WENV170521827
CEWG01039879
258998
Cyanobacteriota
CGT
Thr
>WENV170523324
CEWG01194459
369938
Cyanobacteriota
GTT
Asn
>WENV170522840
CEWG01136635
31819
Cyanobacteriota
TGA
Ser
>WENV170521608
CEWG01023173
65045
Cyanobacteriota
CAG
Leu
>WENV170521716
CEWG01030891
65386
Cyanobacteriota
CAG
Leu
>WENV170521417
CEWG01007803
370924
Cyanobacteriota
CCC
Gly
>WENV170522316
CEWG01085878
370924
Cyanobacteriota
CCC
Gly
>WENV170523460
CEWG01209596
105814
Cyanobacteriota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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