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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170530990
CEWK01082818
17426
Gammaproteobacteria
GCT
Ser
>WENV170530634
CEWK01039056
244202
Gammaproteobacteria
TTT
Lys
>WENV170530329
CEWK01012061
46594
Gammaproteobacteria
GGA
Ser
>WENV170531231
CEWK01111889
154268
Gammaproteobacteria
ACG
Arg
>WENV170530246
CEWK01005511
240642
Gammaproteobacteria
GTT
Asn
>WENV170530639
CEWK01039951
145562
Gammaproteobacteria
CAT
Met
>WENV170531562
CEWK01143446
411766
Gammaproteobacteria
GCA
Cys
>WENV170530855
CEWK01065833
238510
Gammaproteobacteria
GCC
Gly
>WENV170530719
CEWK01049946
238510
Gammaproteobacteria
GCC
Gly
>WENV170531638
CEWK01200126
145491
Gammaproteobacteria
GGG
Pro
>WENV170531247
CEWK01114448
247088
Gammaproteobacteria
CCA
Trp
>WENV170530858
CEWK01066597
247088
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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