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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170532573
CEWO01051311
129948
Alphaproteobacteria
>WENV170533004
CEWO01087008
129948
Alphaproteobacteria
>WENV170532073
CEWO01017713
175228
Alphaproteobacteria
CAT
Met
>WENV170534443
CEWO01254789
409499
Alphaproteobacteria
TTG
Gln
>WENV170533479
CEWO01133737
32122
Alphaproteobacteria
GCT
Ser
>WENV170531876
CEWO01003483
406362
Alphaproteobacteria
GAA
Phe
>WENV170531921
CEWO01007006
406362
Alphaproteobacteria
GAA
Phe
>WENV170533201
CEWO01105904
406362
Alphaproteobacteria
GAA
Phe
>WENV170533715
CEWO01156184
406362
Alphaproteobacteria
GAA
Phe
>WENV170531925
CEWO01007178
114680
Alphaproteobacteria
TAG
Leu
>WENV170533149
CEWO01100737
114680
Alphaproteobacteria
TAG
Leu
>WENV170533782
CEWO01162501
114680
Alphaproteobacteria
TAG
Leu
>WENV170534789
CEWO01374644
391194
Alphaproteobacteria
GGT
Thr
>WENV170533014
CEWO01088755
374019
Alphaproteobacteria
GAC
Val
>WENV170534011
CEWO01181922
264419
Alphaproteobacteria
TTT
Lys
>WENV170532795
CEWO01070052
377113
Alphaproteobacteria
GAC
Val
>WENV170532335
CEWO01034183
205335
Alphaproteobacteria
GGG
Pro
>WENV170533190
CEWO01105358
205335
Alphaproteobacteria
GGG
Pro
>WENV170533470
CEWO01132300
309182
Alphaproteobacteria
TAC
Val
>WENV170533065
CEWO01093043
209273
Alphaproteobacteria
GTG
His
>WENV170532326
CEWO01033879
449739
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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