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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170541468
CXPO01000173
131075
Actinomycetota
TAA
Leu
>WENV170541477
CXPO01000345
369047
Actinomycetota
TTC
Glu
>WENV170541469
CXPO01000205
469498
Actinomycetota
CCC
Gly
>WENV170541446
CXPO01000035
288631
Actinomycetota
CCT
Arg
>WENV170541454
CXPO01000061
328213
Actinomycetota
GTT
Asn
>WENV170541471
CXPO01000262
328213
Actinomycetota
GTT
Asn
>WENV170541451
CXPO01000045
162424
Actinomycetota
>WENV170541462
CXPO01000114
29101
Actinomycetota
GAG
Leu
>WENV170541463
CXPO01000162
162454
Actinomycetota
TCT
Arg
>WENV170541472
CXPO01000278
158695
Actinomycetota
ACG
Arg
>WENV170541483
CXPO01000730
158695
Actinomycetota
ACG
Arg
>WENV170541475
CXPO01000320
116981
Actinomycetota
GTA
Tyr
>WENV170541476
CXPO01000320
158694
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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