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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170543289
CXQQ01000262
235347
Actinomycetota
GGC
Ala
>WENV170543290
CXQQ01000262
235347
Actinomycetota
GGC
Ala
>WENV170543256
CXQQ01000034
201717
Actinomycetota
CTT
Lys
>WENV170543250
CXQQ01000027
144600
Actinomycetota
TGG
Pro
>WENV170543267
CXQQ01000073
235194
Actinomycetota
GTG
His
>WENV170543243
CXQQ01000015
158720
Actinomycetota
ACG
Arg
>WENV170543244
CXQQ01000015
158720
Actinomycetota
ACG
Arg
>WENV170543263
CXQQ01000044
144826
Actinomycetota
GGG
Pro
>WENV170543254
CXQQ01000031
23370
Actinomycetota
GCT
Ser
>WENV170543281
CXQQ01000183
174149
Actinomycetota
GAT
Ile
>WENV170543279
CXQQ01000181
338239
Actinomycetota
TTC
Glu
>WENV170543282
CXQQ01000183
235174
Actinomycetota
TGC
Ala
>WENV170543277
CXQQ01000161
235101
Actinomycetota
TTT
Lys
>WENV170543246
CXQQ01000018
356045
Actinomycetota
GAC
Val
>WENV170543240
CXQQ01000010
356045
Actinomycetota
GAC
Val
>WENV170543257
CXQQ01000035
145345
Actinomycetota
TAC
Val
>WENV170543247
CXQQ01000018
235199
Actinomycetota
CAC
Val
>WENV170543241
CXQQ01000010
235199
Actinomycetota
CAC
Val
>WENV170543292
CXQQ01000356
338235
Actinomycetota
CCC
Gly
>WENV170543270
CXQQ01000082
313386
Actinomycetota
CGT
Thr
>WENV170543276
CXQQ01000156
367535
Actinomycetota
CTG
Gln
>WENV170543283
CXQQ01000187
413665
Actinomycetota
TTG
Gln
>WENV170543278
CXQQ01000167
45154
Actinomycetota
TGA
Ser
>WENV170543248
CXQQ01000022
254857
Actinomycetota
CCG
Arg
>WENV170543253
CXQQ01000031
144700
Actinomycetota
CAT
Met
>WENV170543275
CXQQ01000156
295695
Actinomycetota
CTC
Glu
>WENV170543258
CXQQ01000037
235148
Actinomycetota
GTT
Asn
>WENV170543274
CXQQ01000156
53078
Actinomycetota
GGA
Ser
>WENV170543264
CXQQ01000057
144825
Actinomycetota
CAT
Met
>WENV170543262
CXQQ01000042
119508
Actinomycetota
TAA
Leu
>WENV170543255
CXQQ01000032
235348
Actinomycetota
CCT
Arg
>WENV170543271
CXQQ01000082
113601
Actinomycetota
TAG
Leu
>WENV170543251
CXQQ01000027
144595
Actinomycetota
CAA
Leu
>WENV170543268
CXQQ01000076
431657
Actinomycetota
CCC
Gly
>WENV170543261
CXQQ01000041
45852
Actinomycetota
CGA
Ser
>WENV170543272
CXQQ01000097
80622
Actinomycetota
CAG
Leu
>WENV170543265
CXQQ01000062
16222
Actinomycetota
GAG
Leu
>WENV170543259
CXQQ01000037
243162
Actinomycetota
GTT
Asn
>WENV170543252
CXQQ01000031
95593
Actinomycetota
>WENV170543273
CXQQ01000127
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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