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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170543680
CXQX01000040
190892
Actinomycetota
CAT
Met
>WENV170543664
CXQX01000013
293317
Actinomycetota
GGC
Ala
>WENV170543665
CXQX01000013
293317
Actinomycetota
GGC
Ala
>WENV170543682
CXQX01000048
322268
Actinomycetota
CGT
Thr
>WENV170543666
CXQX01000013
211952
Actinomycetota
ACG
Arg
>WENV170543667
CXQX01000013
211952
Actinomycetota
ACG
Arg
>WENV170543662
CXQX01000007
257345
Actinomycetota
CCT
Arg
>WENV170543672
CXQX01000022
167861
Actinomycetota
CAA
Leu
>WENV170543673
CXQX01000022
159159
Actinomycetota
TGG
Pro
>WENV170543698
CXQX01000106
49789
Actinomycetota
CGA
Ser
>WENV170543677
CXQX01000034
218329
Actinomycetota
CTT
Lys
>WENV170543661
CXQX01000001
169995
Actinomycetota
GGG
Pro
>WENV170543671
CXQX01000020
49723
Actinomycetota
TGA
Ser
>WENV170543700
CXQX01000123
131003
Actinomycetota
TAA
Leu
>WENV170543703
CXQX01000144
448231
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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