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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170544575
CXRL01000019
190892
Actinomycetota
CAT
Met
>WENV170544548
CXRL01000009
293317
Actinomycetota
GGC
Ala
>WENV170544594
CXRL01000066
293317
Actinomycetota
GGC
Ala
>WENV170544567
CXRL01000017
322268
Actinomycetota
CGT
Thr
>WENV170544549
CXRL01000009
211952
Actinomycetota
ACG
Arg
>WENV170544550
CXRL01000009
211952
Actinomycetota
ACG
Arg
>WENV170544543
CXRL01000008
257345
Actinomycetota
CCT
Arg
>WENV170544547
CXRL01000009
238709
Actinomycetota
CAA
Leu
>WENV170544552
CXRL01000009
159159
Actinomycetota
TGG
Pro
>WENV170544555
CXRL01000011
49789
Actinomycetota
CGA
Ser
>WENV170544583
CXRL01000028
328213
Actinomycetota
GTT
Asn
>WENV170544579
CXRL01000020
218329
Actinomycetota
CTT
Lys
>WENV170544566
CXRL01000013
169995
Actinomycetota
GGG
Pro
>WENV170544556
CXRL01000011
49723
Actinomycetota
TGA
Ser
>WENV170544585
CXRL01000032
470684
Actinomycetota
CCC
Gly
>WENV170544546
CXRL01000009
131003
Actinomycetota
TAA
Leu
>WENV170544592
CXRL01000062
372017
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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