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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170544599
CXRM01000003
190892
Actinomycetota
CAT
Met
>WENV170544628
CXRM01000015
293317
Actinomycetota
GGC
Ala
>WENV170544629
CXRM01000015
293317
Actinomycetota
GGC
Ala
>WENV170544603
CXRM01000004
322268
Actinomycetota
CGT
Thr
>WENV170544609
CXRM01000006
211952
Actinomycetota
ACG
Arg
>WENV170544610
CXRM01000006
211952
Actinomycetota
ACG
Arg
>WENV170544655
CXRM01000172
211952
Actinomycetota
ACG
Arg
>WENV170544656
CXRM01000172
211952
Actinomycetota
ACG
Arg
>WENV170544634
CXRM01000027
257345
Actinomycetota
CCT
Arg
>WENV170544627
CXRM01000014
238709
Actinomycetota
CAA
Leu
>WENV170544625
CXRM01000014
159159
Actinomycetota
TGG
Pro
>WENV170544601
CXRM01000003
49789
Actinomycetota
CGA
Ser
>WENV170544611
CXRM01000007
328213
Actinomycetota
GTT
Asn
>WENV170544620
CXRM01000012
218329
Actinomycetota
CTT
Lys
>WENV170544614
CXRM01000007
169995
Actinomycetota
GGG
Pro
>WENV170544624
CXRM01000014
471398
Actinomycetota
TTG
Gln
>WENV170544602
CXRM01000003
49723
Actinomycetota
TGA
Ser
>WENV170544645
CXRM01000054
49723
Actinomycetota
TGA
Ser
>WENV170544616
CXRM01000012
470684
Actinomycetota
CCC
Gly
>WENV170544626
CXRM01000014
131003
Actinomycetota
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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