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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170546639
CXSX01000021
190892
Actinomycetota
CAT
Met
>WENV170546668
CXSX01000074
293317
Actinomycetota
GGC
Ala
>WENV170546669
CXSX01000074
293317
Actinomycetota
GGC
Ala
>WENV170546624
CXSX01000001
322268
Actinomycetota
CGT
Thr
>WENV170546659
CXSX01000047
211952
Actinomycetota
ACG
Arg
>WENV170546673
CXSX01000178
211952
Actinomycetota
ACG
Arg
>WENV170546674
CXSX01000178
211952
Actinomycetota
ACG
Arg
>WENV170546657
CXSX01000037
257345
Actinomycetota
CCT
Arg
>WENV170546629
CXSX01000002
238709
Actinomycetota
CAA
Leu
>WENV170546627
CXSX01000002
159159
Actinomycetota
TGG
Pro
>WENV170546648
CXSX01000030
49789
Actinomycetota
CGA
Ser
>WENV170546642
CXSX01000025
328213
Actinomycetota
GTT
Asn
>WENV170546643
CXSX01000025
328213
Actinomycetota
GTT
Asn
>WENV170546632
CXSX01000007
218329
Actinomycetota
CTT
Lys
>WENV170546670
CXSX01000078
169995
Actinomycetota
GGG
Pro
>WENV170546662
CXSX01000062
49723
Actinomycetota
TGA
Ser
>WENV170546650
CXSX01000031
470684
Actinomycetota
CCC
Gly
>WENV170546628
CXSX01000002
131003
Actinomycetota
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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