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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170547711
CXTR01000101
190892
Actinomycetota
CAT
Met
>WENV170547691
CXTR01000030
293317
Actinomycetota
GGC
Ala
>WENV170547734
CXTR01000556
293317
Actinomycetota
GGC
Ala
>WENV170547735
CXTR01000556
293317
Actinomycetota
GGC
Ala
>WENV170547721
CXTR01000231
322268
Actinomycetota
CGT
Thr
>WENV170547692
CXTR01000033
211952
Actinomycetota
ACG
Arg
>WENV170547690
CXTR01000020
257345
Actinomycetota
CCT
Arg
>WENV170547723
CXTR01000239
167861
Actinomycetota
CAA
Leu
>WENV170547713
CXTR01000115
159159
Actinomycetota
TGG
Pro
>WENV170547687
CXTR01000004
49789
Actinomycetota
CGA
Ser
>WENV170547693
CXTR01000038
328213
Actinomycetota
GTT
Asn
>WENV170547732
CXTR01000555
328213
Actinomycetota
GTT
Asn
>WENV170547733
CXTR01000555
328213
Actinomycetota
GTT
Asn
>WENV170547728
CXTR01000427
218329
Actinomycetota
CTT
Lys
>WENV170547712
CXTR01000110
169995
Actinomycetota
GGG
Pro
>WENV170547688
CXTR01000012
49723
Actinomycetota
TGA
Ser
>WENV170547708
CXTR01000094
470684
Actinomycetota
CCC
Gly
>WENV170547719
CXTR01000189
131003
Actinomycetota
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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