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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170547765
CXTS01000446
19308
Bacillota
GGA
Ser
>WENV170547772
CXTS01000594
47021
Bacillota
TAA
Leu
>WENV170547742
CXTS01000064
257203
Bacillota
GTG
His
>WENV170547755
CXTS01000251
42100
Bacillota
AAG
Leu
>WENV170547757
CXTS01000270
42100
Bacillota
AAG
Leu
>WENV170547758
CXTS01000358
42100
Bacillota
AAG
Leu
>WENV170547797
CXTS01000773
42100
Bacillota
AAG
Leu
>WENV170547801
CXTS01000814
42100
Bacillota
AAG
Leu
>WENV170547752
CXTS01000118
377841
Bacillota
CCG
Arg
>WENV170547738
CXTS01000033
458543
Bacillota
GCA
Cys
>WENV170547744
CXTS01000064
64722
Bacillota
CAA
Leu
>WENV170547764
CXTS01000446
271387
Bacillota
CCT
Arg
>WENV170547741
CXTS01000064
448057
Bacillota
CCA
Trp
>WENV170547750
CXTS01000090
90471
Bacillota
CAG
Leu
>WENV170547763
CXTS01000396
158500
Bacillota
GTT
Asn
>WENV170547791
CXTS01000726
158500
Bacillota
GTT
Asn
>WENV170547747
CXTS01000084
271388
Bacillota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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