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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170559913
CXWL01173911
272678
Bacteroidota
GAA
Phe
>WENV170559479
CXWL01125133
124574
Bacteroidota
GTA
Tyr
>WENV170559526
CXWL01127526
124574
Bacteroidota
GTA
Tyr
>WENV170559633
CXWL01134340
124574
Bacteroidota
GTA
Tyr
>WENV170559732
CXWL01143451
124574
Bacteroidota
GTA
Tyr
>WENV170559891
CXWL01168213
124574
Bacteroidota
GTA
Tyr
>WENV170559908
CXWL01173209
178168
Bacteroidota
GTG
His
>WENV170559478
CXWL01125133
158533
Bacteroidota
TGT
Thr
>WENV170559525
CXWL01127526
158533
Bacteroidota
TGT
Thr
>WENV170555648
CXWL01001587
188657
Bacteroidota
CGG
Pro
>WENV170559564
CXWL01129314
259222
Bacteroidota
TCC
Gly
>WENV170559397
CXWL01121600
169173
Bacteroidota
TCG
Arg
>WENV170559687
CXWL01137503
370411
Bacteroidota
TTC
Glu
>WENV170559829
CXWL01156312
370411
Bacteroidota
TTC
Glu
>WENV170559439
CXWL01123425
126501
Bacteroidota
GTA
Tyr
>WENV170559773
CXWL01149315
126501
Bacteroidota
GTA
Tyr
>WENV170559411
CXWL01122121
42825
Bacteroidota
TAA
Leu
>WENV170559509
CXWL01126392
160921
Bacteroidota
TCG
Arg
>WENV170559246
CXWL01115765
370977
Bacteroidota
TTC
Glu
>WENV170559374
CXWL01120673
138865
Bacteroidota
>WENV170559928
CXWL01177629
138865
Bacteroidota
>WENV170559353
CXWL01120170
61365
Bacteroidota
TGA
Ser
>WENV170559610
CXWL01133579
61365
Bacteroidota
TGA
Ser
>WENV170559527
CXWL01127526
368969
Bacteroidota
GGT
Thr
>WENV170559634
CXWL01134340
368969
Bacteroidota
GGT
Thr
>WENV170559563
CXWL01129278
469950
Bacteroidota
TTG
Gln
>WENV170559632
CXWL01134340
169172
Bacteroidota
TGT
Thr
>WENV170559416
CXWL01122757
171098
Bacteroidota
>WENV170559449
CXWL01123997
107738
Bacteroidota
TAG
Leu
>WENV170559531
CXWL01127733
107738
Bacteroidota
TAG
Leu
>WENV170559408
CXWL01121963
159456
Bacteroidota
GGC
Ala
>WENV170559518
CXWL01127078
159456
Bacteroidota
GGC
Ala
>WENV170559736
CXWL01143914
197208
Bacteroidota
GTT
Asn
>WENV170559904
CXWL01173023
28111
Bacteroidota
GGA
Ser
>WENV170559672
CXWL01136299
257180
Bacteroidota
GCC
Gly
>WENV170559814
CXWL01154108
257180
Bacteroidota
GCC
Gly
>WENV170559807
CXWL01153065
451301
Bacteroidota
CCA
Trp
>WENV170559826
CXWL01156131
160923
Bacteroidota
CAT
Met
>WENV170559373
CXWL01120673
71400
Bacteroidota
GCT
Ser
>WENV170559489
CXWL01125637
257181
Bacteroidota
TTT
Lys
>WENV170559490
CXWL01125637
257181
Bacteroidota
TTT
Lys
>WENV170559594
CXWL01132381
257182
Bacteroidota
>WENV170555520
CXWL01000903
207307
Bacteroidota
GTC
Asp
>WENV170559349
CXWL01120152
65208
Bacteroidota
GCT
Ser
>WENV170559663
CXWL01135328
158528
Bacteroidota
>WENV170559341
CXWL01119946
268445
Bacteroidota
GAA
Phe
>WENV170559651
CXWL01134971
268445
Bacteroidota
GAA
Phe
>WENV170555522
CXWL01000903
140138
Bacteroidota
GAT
Ile
>WENV170559635
CXWL01134340
389826
Bacteroidota
CCA
Trp
>WENV170559528
CXWL01127526
448064
Bacteroidota
CCA
Trp
>WENV170559351
CXWL01120152
188130
Bacteroidota
TCT
Arg
>WENV170559827
CXWL01156312
368967
Bacteroidota
TTC
Glu
>WENV170559828
CXWL01156312
368967
Bacteroidota
TTC
Glu
>WENV170559716
CXWL01141602
41177
Bacteroidota
TAA
Leu
>WENV170559774
CXWL01149588
448062
Bacteroidota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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