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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170559729
CXWL01143305
410336
Gammaproteobacteria
TTG
Gln
>WENV170559754
CXWL01146741
410336
Gammaproteobacteria
TTG
Gln
>WENV170557129
CXWL01019753
309075
Gammaproteobacteria
GTT
Asn
>WENV170559743
CXWL01144485
368846
Gammaproteobacteria
>WENV170557766
CXWL01036778
236332
Gammaproteobacteria
CAT
Met
>WENV170559809
CXWL01153526
86444
Gammaproteobacteria
GAG
Leu
>WENV170557315
CXWL01024006
203391
Gammaproteobacteria
GAT
Ile
>WENV170559472
CXWL01124816
158573
Gammaproteobacteria
CAT
Met
>WENV170559717
CXWL01141634
158259
Gammaproteobacteria
CCT
Arg
>WENV170558362
CXWL01065789
387311
Gammaproteobacteria
TAC
Val
>WENV170557134
CXWL01019826
178972
Gammaproteobacteria
TCT
Arg
>WENV170555693
CXWL01001787
49698
Gammaproteobacteria
GGA
Ser
>WENV170557160
CXWL01020351
257590
Gammaproteobacteria
GGT
Thr
>WENV170559364
CXWL01120504
18229
Gammaproteobacteria
TGA
Ser
>WENV170557128
CXWL01019753
215947
Gammaproteobacteria
ACG
Arg
>WENV170559945
CXWL01181385
179423
Gammaproteobacteria
CAT
Met
>WENV170555621
CXWL01001487
262312
Gammaproteobacteria
TTC
Glu
>WENV170555622
CXWL01001487
262312
Gammaproteobacteria
TTC
Glu
>WENV170559842
CXWL01159882
475606
Gammaproteobacteria
CCC
Gly
>WENV170557022
CXWL01017544
275207
Gammaproteobacteria
GGT
Thr
>WENV170559445
CXWL01123850
26085
Gammaproteobacteria
GGA
Ser
>WENV170559823
CXWL01155584
107419
Gammaproteobacteria
TAA
Leu
>WENV170558653
CXWL01082862
229406
Gammaproteobacteria
TCT
Arg
>WENV170556512
CXWL01009792
462237
Gammaproteobacteria
GCA
Cys
>WENV170555977
CXWL01003591
13081
Gammaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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