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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV005394
EU066445
65502
Bacteroidota
CAA
Leu
>ENV005330
EU059854
54117
Bacteroidota
TGA
Ser
>ENV005390
EU065731
54117
Bacteroidota
TGA
Ser
>ENV000731
AJ937771
258742
Bacteroidota
TTT
Lys
>ENV005393
EU066106
144955
Bacteroidota
GGG
Pro
>ENV001482
AY933592
189189
Bacteroidota
TGC
Ala
>ENV003810
DQ009476
189189
Bacteroidota
TGC
Ala
>ENV001549
AY933626
160457
Bacteroidota
TGC
Ala
>ENV005360
EU062223
205503
Bacteroidota
GTG
His
>ENV005379
EU064215
205503
Bacteroidota
GTG
His
>ENV005410
EU067481
52815
Bacteroidota
TAA
Leu
>ENV005338
EU061006
193554
Bacteroidota
GTT
Asn
>ENV005339
EU061006
193554
Bacteroidota
GTT
Asn
>ENV000369
AF422493
194726
Bacteroidota
TGC
Ala
>ENV001508
AY933605
194726
Bacteroidota
TGC
Ala
>ENV005344
EU061246
159415
Bacteroidota
>ENV005366
EU063101
166971
Bacteroidota
>ENV005362
EU062567
54039
Bacteroidota
TGA
Ser
>ENV005380
EU064307
54039
Bacteroidota
TGA
Ser
>ENV005416
EU067686
54039
Bacteroidota
TGA
Ser
>ENV001544
AY933624
175654
Bacteroidota
GAT
Ile
>ENV005387
EU065434
193541
Bacteroidota
GTT
Asn
>ENV005388
EU065434
193541
Bacteroidota
GTT
Asn
>ENV001500
AY933601
178382
Bacteroidota
TGC
Ala
>ENV003157
DQ009092
178382
Bacteroidota
TGC
Ala
>ENV003160
DQ009094
178382
Bacteroidota
TGC
Ala
>ENV003162
DQ009095
178382
Bacteroidota
TGC
Ala
>ENV003650
DQ009385
178382
Bacteroidota
TGC
Ala
>ENV000952
AY212800
257182
Bacteroidota
>ENV001469
AY933586
160456
Bacteroidota
GAT
Ile
>ENV001493
AY933598
160456
Bacteroidota
GAT
Ile
>ENV001514
AY933609
160456
Bacteroidota
GAT
Ile
>ENV001518
AY933611
160456
Bacteroidota
GAT
Ile
>ENV001520
AY933612
160456
Bacteroidota
GAT
Ile
>ENV001524
AY933614
160456
Bacteroidota
GAT
Ile
>ENV001536
AY933620
160456
Bacteroidota
GAT
Ile
>ENV001562
AY933633
160456
Bacteroidota
GAT
Ile
>ENV001564
AY933634
160456
Bacteroidota
GAT
Ile
>ENV002960
AY934393
160456
Bacteroidota
GAT
Ile
>ENV003203
DQ009116
160456
Bacteroidota
GAT
Ile
>ENV005324
EU058573
18452
Bacteroidota
GGA
Ser
>ENV003814
DQ010158
140138
Bacteroidota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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